Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_8310 |
Symbol | moaD |
ID | 7365261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011982 |
Strand | - |
Start bp | 234022 |
End bp | 235884 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643641866 |
Product | ABC transporter nucleotide binding/ATPase protein |
Protein accession | YP_002540163 |
Protein GI | 222080299 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.357305 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCACGC CTCCTATGCC TTCGCTCGAA ACGCGCAGTT CACCGGAAGT GGTACAGCCC GTTCTTTCGG TTGCAGATCT GAAAGTATCG TTCCAAATGC CAAACGGCTG GAAGCCGGTG GTCCATGGCA TTTCGTTCGA TATCAAGCCT CGCGAGACAG TCGCCATTGT CGGCGAATCC GGCTCGGGCA AAAGTGTCAC CTCGCTTGCG ATCATGCGGC TGCTGCCCGC AGAGCAAAGC CGAATAGAGG GGAGAATTCA CCTCCACGGC AAGGAGTTGC TATCTTTGCA GCCTTCAGAA ATGCGGGAGA TCCGCGGCCG CGACATCGGT ATGATTTTTC AGGAACCGAT GACCAGTCTC AACCCATCGA TGAAGATCGG CATACAAATC TCCGAAGCCT TGATCAGTCA TCGCGGCATG GATTGGGACG AAGCTGCGAA AGAGTCGGTG CGCTTGATGG AGCGCGTGCG CATTCCTGTG GCTTCCCGGC GATTTCACGA CTATCCGCAT CGTCTGTCGG GAGGCATGCG CCAACGCATC ATGATCGCCA TGGCGCTTGC TTGCTCACCA CGCCTTCTCA TCGCTGATGA GCCTACGACC GCGCTCGATG TGACCATTCA AGCCGAAATC CTTTCTTTGA TGCGCGAGCT TCAGGAGGAA GAGGATATGT CCGTCCTTTT CATCACCCAT GACATGGGCG TGGTTGCGGA GACGGCTGAC CGAACTCTCG TTATGTATCA TGGCAACATG GTTGAGCAGG GTTCTACTGA GCGGCTGTTT TCAAAAGCGG AGCATCCCTA TAGCCGTGCG CTCATCTCGG CCGTCCCGCA GCTCGGCTCG ATGAAAGATA TCACAAACCC GGTCCGTTAT CCGGTGATCG ATGTGAAAAC GGGCGAAGAG ACGATAGGCG CCCGTGCAAT GCAATCCTCA CCGAAGTCGG AGCAGGTACC GTTACTCCAA GTTCAGGATC TGCAGGTTCG CTTCAATATC CACTCAGGGC TTCTCGGTCG GGTTAGCGGT CGCGTACACG CGGTCGAAAA CGTTTCCTTC GACTTACAGG AGCGGGAAAC GCTTGCGATT GTGGGAGAGT CGGGCAGTGG TAAGTCAACG ATCGGTCGAG CGATCACACG CCTCGTCAAT ACGGTCGGAG GCGATGTCCG GCTCCGAGGG AAAAGTGTTC TTGACTTGAA GGGTGAAACA GCCCGCCAGA TGCGCCAACA GGTGCAAATG ATCTTCCAAG ATCCCTATGC GAGCCTCGAC CCTCGTAAGT CAGTCCGCAA GGCGATTGCC GAGCCGATTC TTGCACACAG TCTTGCACGC GCCAGCGAGA TTGATGGAAT CGTGTCCGAT CTATTGATGA AGGTTGGCCT CCCGCCTGAG GTGATGCACC GACGTCCCCA TGAGTTCTCC GGCGGGCAAA GGCAACGGAT ATGCATCGCG CGCGCTCTCG CCCTGAAACC AGCTATTCTC GTGGCTGACG AGGCCGTTTC TGCGCTCGAT GTCTCCATCA AAGCGCAAGT CATCAATCTG ATGATGGATC TGCAGCAAGA ACTCGGACTG TCGTACCTCT TCATCTCGCA TGATATGGCT GCGGTGGAAC GGATCAGCCA TCGCGTTGCA GTTATGTACC TGGGGGAGAT TGTAGAGATT GGGCCGCGTC AACAGGTGCT GAACAATCCC TGTCATCCCT ATACCCAGAA GCTGATCGCC GCCGTGCCGG TTCCAGATCC TGCTTTACGG AACAGGGACA AGCCGAAAGA CAGCGCCGGC GAAATACGCA ATGCGGTTAG ACCGGTCGAT TTCGTCGTTC CGGAAAGGCG GTACCGAGAG ATTTCTGCAG GACATCTCGT GATGGATGCC TAA
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Protein sequence | MITPPMPSLE TRSSPEVVQP VLSVADLKVS FQMPNGWKPV VHGISFDIKP RETVAIVGES GSGKSVTSLA IMRLLPAEQS RIEGRIHLHG KELLSLQPSE MREIRGRDIG MIFQEPMTSL NPSMKIGIQI SEALISHRGM DWDEAAKESV RLMERVRIPV ASRRFHDYPH RLSGGMRQRI MIAMALACSP RLLIADEPTT ALDVTIQAEI LSLMRELQEE EDMSVLFITH DMGVVAETAD RTLVMYHGNM VEQGSTERLF SKAEHPYSRA LISAVPQLGS MKDITNPVRY PVIDVKTGEE TIGARAMQSS PKSEQVPLLQ VQDLQVRFNI HSGLLGRVSG RVHAVENVSF DLQERETLAI VGESGSGKST IGRAITRLVN TVGGDVRLRG KSVLDLKGET ARQMRQQVQM IFQDPYASLD PRKSVRKAIA EPILAHSLAR ASEIDGIVSD LLMKVGLPPE VMHRRPHEFS GGQRQRICIA RALALKPAIL VADEAVSALD VSIKAQVINL MMDLQQELGL SYLFISHDMA AVERISHRVA VMYLGEIVEI GPRQQVLNNP CHPYTQKLIA AVPVPDPALR NRDKPKDSAG EIRNAVRPVD FVVPERRYRE ISAGHLVMDA
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