Gene Avi_8310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_8310 
SymbolmoaD 
ID7365261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011982 
Strand
Start bp234022 
End bp235884 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content56% 
IMG OID643641866 
ProductABC transporter nucleotide binding/ATPase protein 
Protein accessionYP_002540163 
Protein GI222080299 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.357305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACGC CTCCTATGCC TTCGCTCGAA ACGCGCAGTT CACCGGAAGT GGTACAGCCC 
GTTCTTTCGG TTGCAGATCT GAAAGTATCG TTCCAAATGC CAAACGGCTG GAAGCCGGTG
GTCCATGGCA TTTCGTTCGA TATCAAGCCT CGCGAGACAG TCGCCATTGT CGGCGAATCC
GGCTCGGGCA AAAGTGTCAC CTCGCTTGCG ATCATGCGGC TGCTGCCCGC AGAGCAAAGC
CGAATAGAGG GGAGAATTCA CCTCCACGGC AAGGAGTTGC TATCTTTGCA GCCTTCAGAA
ATGCGGGAGA TCCGCGGCCG CGACATCGGT ATGATTTTTC AGGAACCGAT GACCAGTCTC
AACCCATCGA TGAAGATCGG CATACAAATC TCCGAAGCCT TGATCAGTCA TCGCGGCATG
GATTGGGACG AAGCTGCGAA AGAGTCGGTG CGCTTGATGG AGCGCGTGCG CATTCCTGTG
GCTTCCCGGC GATTTCACGA CTATCCGCAT CGTCTGTCGG GAGGCATGCG CCAACGCATC
ATGATCGCCA TGGCGCTTGC TTGCTCACCA CGCCTTCTCA TCGCTGATGA GCCTACGACC
GCGCTCGATG TGACCATTCA AGCCGAAATC CTTTCTTTGA TGCGCGAGCT TCAGGAGGAA
GAGGATATGT CCGTCCTTTT CATCACCCAT GACATGGGCG TGGTTGCGGA GACGGCTGAC
CGAACTCTCG TTATGTATCA TGGCAACATG GTTGAGCAGG GTTCTACTGA GCGGCTGTTT
TCAAAAGCGG AGCATCCCTA TAGCCGTGCG CTCATCTCGG CCGTCCCGCA GCTCGGCTCG
ATGAAAGATA TCACAAACCC GGTCCGTTAT CCGGTGATCG ATGTGAAAAC GGGCGAAGAG
ACGATAGGCG CCCGTGCAAT GCAATCCTCA CCGAAGTCGG AGCAGGTACC GTTACTCCAA
GTTCAGGATC TGCAGGTTCG CTTCAATATC CACTCAGGGC TTCTCGGTCG GGTTAGCGGT
CGCGTACACG CGGTCGAAAA CGTTTCCTTC GACTTACAGG AGCGGGAAAC GCTTGCGATT
GTGGGAGAGT CGGGCAGTGG TAAGTCAACG ATCGGTCGAG CGATCACACG CCTCGTCAAT
ACGGTCGGAG GCGATGTCCG GCTCCGAGGG AAAAGTGTTC TTGACTTGAA GGGTGAAACA
GCCCGCCAGA TGCGCCAACA GGTGCAAATG ATCTTCCAAG ATCCCTATGC GAGCCTCGAC
CCTCGTAAGT CAGTCCGCAA GGCGATTGCC GAGCCGATTC TTGCACACAG TCTTGCACGC
GCCAGCGAGA TTGATGGAAT CGTGTCCGAT CTATTGATGA AGGTTGGCCT CCCGCCTGAG
GTGATGCACC GACGTCCCCA TGAGTTCTCC GGCGGGCAAA GGCAACGGAT ATGCATCGCG
CGCGCTCTCG CCCTGAAACC AGCTATTCTC GTGGCTGACG AGGCCGTTTC TGCGCTCGAT
GTCTCCATCA AAGCGCAAGT CATCAATCTG ATGATGGATC TGCAGCAAGA ACTCGGACTG
TCGTACCTCT TCATCTCGCA TGATATGGCT GCGGTGGAAC GGATCAGCCA TCGCGTTGCA
GTTATGTACC TGGGGGAGAT TGTAGAGATT GGGCCGCGTC AACAGGTGCT GAACAATCCC
TGTCATCCCT ATACCCAGAA GCTGATCGCC GCCGTGCCGG TTCCAGATCC TGCTTTACGG
AACAGGGACA AGCCGAAAGA CAGCGCCGGC GAAATACGCA ATGCGGTTAG ACCGGTCGAT
TTCGTCGTTC CGGAAAGGCG GTACCGAGAG ATTTCTGCAG GACATCTCGT GATGGATGCC
TAA
 
Protein sequence
MITPPMPSLE TRSSPEVVQP VLSVADLKVS FQMPNGWKPV VHGISFDIKP RETVAIVGES 
GSGKSVTSLA IMRLLPAEQS RIEGRIHLHG KELLSLQPSE MREIRGRDIG MIFQEPMTSL
NPSMKIGIQI SEALISHRGM DWDEAAKESV RLMERVRIPV ASRRFHDYPH RLSGGMRQRI
MIAMALACSP RLLIADEPTT ALDVTIQAEI LSLMRELQEE EDMSVLFITH DMGVVAETAD
RTLVMYHGNM VEQGSTERLF SKAEHPYSRA LISAVPQLGS MKDITNPVRY PVIDVKTGEE
TIGARAMQSS PKSEQVPLLQ VQDLQVRFNI HSGLLGRVSG RVHAVENVSF DLQERETLAI
VGESGSGKST IGRAITRLVN TVGGDVRLRG KSVLDLKGET ARQMRQQVQM IFQDPYASLD
PRKSVRKAIA EPILAHSLAR ASEIDGIVSD LLMKVGLPPE VMHRRPHEFS GGQRQRICIA
RALALKPAIL VADEAVSALD VSIKAQVINL MMDLQQELGL SYLFISHDMA AVERISHRVA
VMYLGEIVEI GPRQQVLNNP CHPYTQKLIA AVPVPDPALR NRDKPKDSAG EIRNAVRPVD
FVVPERRYRE ISAGHLVMDA