Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_8271 |
Symbol | |
ID | 7365231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011982 |
Strand | - |
Start bp | 201537 |
End bp | 202619 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643641841 |
Product | D-vitopine dehydrogenase |
Protein accession | YP_002540138 |
Protein GI | 222080274 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.655661 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAAAG TAGCAATTCT CGGTGCGGGG AACCTTGCTC TAACGTTTGC TGGAGACATC GCTCGAAGGC TCAACGAGGA AGTCACAGCT GTTATCTGGG CACCAACCAC CAACCGAAGA AATTTCAATG AAGTCAGGGG TATCGGAACC TTGGAGCTGG TCGGCCCCGA CTATGAAGGC GCTTTTACTC CCCAGTTGGA GGATGATCTT GAAGCGGCAA TCTTGGACGC TGAGTTCATT TTTCTAACGG TACCGACTCT GGCGCAGGAG GGAATTCTGC GCGAGTTGGT GAAGTTCGAT CTGAGCGAAA CTGTGCTCAT CGCGTTGCCA GGTAGTGCAA CTTCCCTGAC TTGTAAGAAT ATCTTGTTCC CAAGCCATTC ACCCGTTGCT GTTATTGAAT CAACAACGTC GCCCTACGCC TGCCGCCGTA TCGGCGAACG CGTTCATATG CTTGGCGTGA AAGCCTGCTT CGAGGTTGCC GCAACAAGCC TTCTGAGCAA CGATCTCACA AGTCGTTTTG AGGCCCTTTT CCCAAACCGA CTGCAGTGGT ACAAGGATGC TGCCTCCATA TTTTTCTCAA ATACCAATCC GGTTGTGCAT CCTCCAGGGA TCCTGGTGGC GAAAGATGCG ATTGAAAATG GTATGAGCCC TCTACCTAAA TTCTACAGGG AGTTTGTTCC GGCAGCCATC GAGCGTGTTC AGGAATTAGA CAATGAACGC CTCGAGATTA TTGCGGCGCT CGGCCTCGAG TCCGAAACAG GTTTCACATA TTCTAAAAAG TGGTATGGCG GCCAGGCCAC CGAGTGGAAG GAATTCTTTG AGACCTACGA AGGTTATGCT GAAGTCGGGA CACCCACAAC AATGCATCAC CGCTACTTAA CTGAAGATGT CAAACACATC ATGGTGCTCT GGGTTCAGAT AGCAGAAGTG GCCGGAGTGC AGGTTCCAGC GATGAAGTCT GTCATAAAGG AGGCCGGGAA CGTTCTCTAC GAGGACCTCT TTATGACTGG CAGGACTCTT GCCTCAATGA ACTTAGGTGG CGCTAACCCA TATCGTATTG TCGACGCGCT CAATGGAAAC TGA
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Protein sequence | MSKVAILGAG NLALTFAGDI ARRLNEEVTA VIWAPTTNRR NFNEVRGIGT LELVGPDYEG AFTPQLEDDL EAAILDAEFI FLTVPTLAQE GILRELVKFD LSETVLIALP GSATSLTCKN ILFPSHSPVA VIESTTSPYA CRRIGERVHM LGVKACFEVA ATSLLSNDLT SRFEALFPNR LQWYKDAASI FFSNTNPVVH PPGILVAKDA IENGMSPLPK FYREFVPAAI ERVQELDNER LEIIAALGLE SETGFTYSKK WYGGQATEWK EFFETYEGYA EVGTPTTMHH RYLTEDVKHI MVLWVQIAEV AGVQVPAMKS VIKEAGNVLY EDLFMTGRTL ASMNLGGANP YRIVDALNGN
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