Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_8174 |
Symbol | hyuB |
ID | 7365080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011982 |
Strand | - |
Start bp | 121315 |
End bp | 123072 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643641782 |
Product | hydantoin utilization protein |
Protein accession | YP_002540079 |
Protein GI | 222080216 |
COG category | [E] Amino acid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.246451 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACACCA CTACCGAGAA CACCCCCGCC GCAAGCGTTG ATCCAGTAAC GCTTGAAATC GTTCGCAACG CACTGACCTC GATCGCCGAA CGCAATGCCC ATCGCATGAT CCGCGCATCG ACGTCGATCA TCGTCAAGGA AATGGAAGAT TGCTCCGCTG CCGTCTTCGA CGGACAGGGA CGCCTCTTGG CGGAATCTGC GACTATTCCA ATCCACCTCA ACTGCACCGG CGTTTGCCTG CGGACCATTC TTGAACAGTA CCACCCGCCG GAAACATGGC GCCCGGGCGA CATCGTCATT ACCAACGACC CCTATGCGGG CGGTGCCTCG ATGTCGACGG CCCATACGAA CGACTATGTC GTGTTCATGC CCGTGTTTTT CGAGGACTTA CTGGTCGGCT TCACAGGCCT GATGGTCCAC CATCAGGAAA TCGGCGCCAT GAACATGGCG ACCCGCGGCT GGAACCTGGA GATCTGGCAG GAGGGCCTGC GCGTTCCTCC GATGAAGATC GGCGAAAACG GGATCGTCGA CGAAAGATGC ATGCGCATCA TCCTCAATAA CACCCGCCTT CCCGACAACA TGGAAAACGA CCTCTTCGCG CAGGTCGCAT CAGTGGCTGC GGCCGCCGAA GACATGAAAG CCATGTTCGA CCGCTACGGC CGCGAAACGC TCTTGCGTTG CTTCGAAGCG CTGATCGACT ATTCAGAGCA GCGTACCCGC GCAGAAATCT CGCAAATCCC GGACGGTGTC TACGAACACG AGGAACTCAT CCTCGATGAC GGCGCCAAGA GTGGACCGTA CAAGCTGAAG CTCGCCATCC ACAAGACTGG CTCCGACATC CTCTTCGACT TCACCGGCAC CGATCCGCAG ATCCGCGGAC CGATCAACGC CCCGCTCGCC ACGACCTGGG CGGCTATCTT CTACGCGATG CGTTGTGTGA CCGACCCTTC GATTCCGTCG ACAGAAGGGA ACAAGCGCCC ATTCAAAGTC ATCGCACCGG AAGGCACGCT GGTAAACGCC AAGAAACCTG CGGCTGTCTA CCAGCGCATG GTGGTGTGCC ACAGCCTGGT GGACCTCGTG ATGGGTGCGC TTTCGCAGAT CGTGCCGGAA CGCGTCATGG GCGACTCTTG TGGATGCCTT TATAACTTCA CCTCAGCGAG GGAGCGCGAC ACGGGCAATC CGAGCGTATT CGGCGAAGTG GTACCGGGCG GACTTGGTGC AACGTCCAAG GCCGACGGCA TCGACGTCAT GTCTTGCCAC GTCACCAATT GCCCGATCCC TCCGATTGAA GCGACCGAGG CCGAATGCCC GGTTCTTTAT GTCCAGCGCG AGCTTCAGTC TGGAACTGGA GGCGCCGGCA AATGGCGCGG CGGCGTCGGT CAGGTCCTGG CCTATAAGGT GCTGGGCGAC CTGGCGGAAC TCCAGCATAC CTCCCAGAAA TCCGTCACAC TCCCCCAGGG TGTGGCTGGC GGCTTCCCAG GTGGCGGCGG GCGTTGGGTG ATTAACGAAG GAACACCGAA CGCACGAGTG CTCGAGCATT CGATCGGCGA ACTCGAAATG CTCGACTATG GCGACGTCGT GACCCACTAC ACGCCGGGCG GCGGTGGTTT CGGCAATCCT CTCGAGCGTG ATCCAGCTTT GGTCCTGCGC GATGTCCGTC ATGGCCTCGT GACCCGCGAG CAGGCCGAGA AAGTCTATGG CGTGAAGGTC GGCGTCGATC TCAAGGAATG GACCCCGACA AACGATCGAG CAGCTTGA
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Protein sequence | MDTTTENTPA ASVDPVTLEI VRNALTSIAE RNAHRMIRAS TSIIVKEMED CSAAVFDGQG RLLAESATIP IHLNCTGVCL RTILEQYHPP ETWRPGDIVI TNDPYAGGAS MSTAHTNDYV VFMPVFFEDL LVGFTGLMVH HQEIGAMNMA TRGWNLEIWQ EGLRVPPMKI GENGIVDERC MRIILNNTRL PDNMENDLFA QVASVAAAAE DMKAMFDRYG RETLLRCFEA LIDYSEQRTR AEISQIPDGV YEHEELILDD GAKSGPYKLK LAIHKTGSDI LFDFTGTDPQ IRGPINAPLA TTWAAIFYAM RCVTDPSIPS TEGNKRPFKV IAPEGTLVNA KKPAAVYQRM VVCHSLVDLV MGALSQIVPE RVMGDSCGCL YNFTSARERD TGNPSVFGEV VPGGLGATSK ADGIDVMSCH VTNCPIPPIE ATEAECPVLY VQRELQSGTG GAGKWRGGVG QVLAYKVLGD LAELQHTSQK SVTLPQGVAG GFPGGGGRWV INEGTPNARV LEHSIGELEM LDYGDVVTHY TPGGGGFGNP LERDPALVLR DVRHGLVTRE QAEKVYGVKV GVDLKEWTPT NDRAA
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