| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7700 |
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| Symbol | orfB |
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| ID | 7380201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 630217 |
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| End bp | 631296 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643641683 |
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| Product | IS3 family transposase |
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| Protein accession | YP_002539980 |
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| Protein GI | 222102941 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.421259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCGT CGAAGTTTAC GGAAGCGCAA ATCGCGTTTG TGTTGAAGCA GGCTCATGAT
GGAACGCCCA TTGGCGAGGT CTGCCGCAAG GCGGGGATTT CGGACGCTAC GTTTTATAAC
TGGCGCAAAA AAATACACTG GCCTAATGCC GTCAGAGATG AAGCGCCTGC GGCAGTTGGA
AGAGGAAAAT GCCAAACTGA AGCGGATCGT CGCCGATCTC TCTTTAGACA AGGCCATCCT
CCAGGATGTG CTGTCAAAAA AGCTCTGAGG CCTGACGGCA AGCGTCATCT TGTCGACAGG
ATCAAGACGG ACTGGAAGGT TTCGATCCGA CGCGCATGCT CCGTCCTGAA GATCGACCGG
TCCCTTTATG TCTACAAGTC CAAGCGCGGC GATCAGGCCG AACTGAAGCT GAAGATCAAG
GATATCTGCC AGACGCGGGT ACGTTATGGC TATCGTCGTG TGCATGTCTT GATCAGGCGT
GACGGCTGGG TGGTGAATCC GAAGAGAATC TATCGTCTTT ACAAGGAGAT GGACCTGCAA
CTGCGCAACA AGGTGCCAAA ACGGCGCGTC AAAGCAAAGC TGCGATCGCA CCGCACCGCA
GCCACCCGTT CGAACGACGT CTGGGCCATG GATTTCGTGC ATGACCAACT GGCCACAGGT
CGCAAGATCA GGGTTCTCAC GGTTGTCGAT ACCTTCTCGC GCTTCTCTCC GGCGGTAGAT
GCCCGCTTCA GCTATAAAGG GGAAGACGTC GTGCAGACCC TCGAACGCGT ATGCCGGCAG
GTCGGTTACC CGGCCACCAT TCGGATGGAC AACGGCAGCG AATTCATCTC TCGTAACCTC
GATCTCTGGG CCTATCATAG AGGCGTCGTG CTTGACTTCT CGCGGCCGGG CAAGCCAACG
GACAACAGCT ACATCGAGAG CTTTATGTAT AGACGGCCCC GCGGGCGCAA GAGGCTTCTT
ACAAGTTCAG GTCATCATTC GGGTGCGTTC ATGTATACGG CCTTTGGATG CGACCGATAT
TATGGTCGCT GGCCCAGATG GAGTACGCGG ATCGAGGCCT CATCAACGGG ACGCGCTTGA
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| Protein sequence | MKASKFTEAQ IAFVLKQAHD GTPIGEVCRK AGISDATFYN WRKKIHWPNA VRDEAPAAVG
RGKCQTEADR RRSLFRQGHP PGCAVKKALR PDGKRHLVDR IKTDWKVSIR RACSVLKIDR
SLYVYKSKRG DQAELKLKIK DICQTRVRYG YRRVHVLIRR DGWVVNPKRI YRLYKEMDLQ
LRNKVPKRRV KAKLRSHRTA ATRSNDVWAM DFVHDQLATG RKIRVLTVVD TFSRFSPAVD
ARFSYKGEDV VQTLERVCRQ VGYPATIRMD NGSEFISRNL DLWAYHRGVV LDFSRPGKPT
DNSYIESFMY RRPRGRKRLL TSSGHHSGAF MYTAFGCDRY YGRWPRWSTR IEASSTGRA
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