| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7667 |
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| Symbol | |
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| ID | 7380306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 600370 |
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| End bp | 601209 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643641658 |
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| Product | ABC transporter substrate binding protein (amino acid) |
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| Protein accession | YP_002539955 |
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| Protein GI | 222102916 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATGA AATGCATCAC ATTAGGCTTG GCGCTTGCCG CCACCACCGC CATTGCAGCC
CCTGCAAGCG CCGATCAGCT GGCCGATATC ATGGCGGCCA AGACCCTGCG TTGCGCAACC
TTCGCCGATG TTCCCCCCTT TGCCTCTCCA GACCCAAAGA CCCGCGAAAT GGCTGGCTTT
GACGTTGATC TGTGCAACGC CATTGCAGCC AAACTGGGCG TGAAGGCCGA AATCAAGCCG
GTATCGGTGG AAGCCCGCGT GCCCGAAGTC AAGCTTGGCC GCGTCGACAT CACCGTTGCC
AATCTCGCCT ACACTTTGAG CCGCGCCGAA CAGATTCAGT TCAGCGATCC TTACTATCTC
GCCAAGGAAA TGCTGATTGT GCCTGCCGAC ACGGCTGGCA AGACAAAGGC TGATTTCTCC
GGCAAGCGTT TGGCCTCCAC CAAGGGTTCT ACATCCGAGA TGTCGATCAA GCTCAACAAG
TCGGACCCGT TGACGTTTCA GGATACGGCA TCGGCCTATC TCGCCGTTCA GCAGGGCAAG
GCTGAAGGCA TGGTTGCCAA CACCATGACC ACCACCAAAT TCGTCAACGA ATCCCAGACC
AAGGGCAAGA GGATGCGGAT GATCGATGAT CCGATGCTTT ATCAGCCCAT CGGTGTTGGC
ATGAAAAAGG ACGAGCCAGC CCTGACCGCC AAGATCAACG ATACGCTGCG CGCGCTGGAT
GCTGATGGCG AAATCAACAA AATCTGGAAC AAATGGCTTG GCCCGGACAC CGAATATAAA
ATGACCCGCA CCGACAAGGT TGTGAAATTG AGCGAATTGA AGTTCGACCC GATTCCATAA
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| Protein sequence | MNMKCITLGL ALAATTAIAA PASADQLADI MAAKTLRCAT FADVPPFASP DPKTREMAGF
DVDLCNAIAA KLGVKAEIKP VSVEARVPEV KLGRVDITVA NLAYTLSRAE QIQFSDPYYL
AKEMLIVPAD TAGKTKADFS GKRLASTKGS TSEMSIKLNK SDPLTFQDTA SAYLAVQQGK
AEGMVANTMT TTKFVNESQT KGKRMRMIDD PMLYQPIGVG MKKDEPALTA KINDTLRALD
ADGEINKIWN KWLGPDTEYK MTRTDKVVKL SELKFDPIP
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