| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7664 |
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| Symbol | |
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| ID | 7380304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 598771 |
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| End bp | 599523 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641656 |
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| Product | ABC transporter membrane spanning protein (amino acid) |
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| Protein accession | YP_002539953 |
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| Protein GI | 222102914 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.48726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCACG ACATCATCAA GATTGTGCAG GACTATTGGT TGCTGTTGTT GATCGGCCAA
TATCCCAATG GCCCGCTCGG TGGCCTTGCC AACACGCTGA TCCTATCGGT TTTCAGCATC
GCGCTGGCCT TTCCCCTCAG CATTCTTTTG GCCCTTGCGC GCATGTCCAA ATGGCGCACG
CTGCGCTGGC CGGTCACGTT CCTCGTCTAT GTCACCCGTG GCGTGCCGTT GCTGATGTTG
ATTTTGTGGT GCTATTTTCT GGTGCCGCTG CTCACGGGGG CCGATGTGCC AAGCTTTATC
ACCATGCTGA CAACGCTGGT GGTGTATCAA AGCTGCTTTC TCAGCGAAGT TGTGCGAAGC
GGCATTGTTG CGCTGGGCCA TGGACAGATG GAAGCCGCCA AGGCCCTTGG GCACAGCTAT
CCCAGCGCCA TGCGCTATGT GGTTTTGCCG CAGGCGCTGT ACAATGTCAT TCCCAGCATC
CTGTCTACCT TCGTCTCAAC CATCAAGGAC ACAACACTGG GCTCTGTCAT CAATGTGCCG
GACCTGACCT TTGCTGCCAA TCAGGTCAAC AATGATCTGC TGACCCAGCC GTTTCAGGTC
TACCTGATCC TTGCCCTGAT CTATTACGTG ATTTGCTGGA GCCTGACCCA TGCCGCCAAA
CGATTGGAGG GCAGCATCTC CCGCCGCCGT GCCGGTCTGT CCGGCAAAGG TGAAGACGCC
CCCAGCATCA CGCCCCAACT TGTCTCGGAG TAG
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| Protein sequence | MIHDIIKIVQ DYWLLLLIGQ YPNGPLGGLA NTLILSVFSI ALAFPLSILL ALARMSKWRT
LRWPVTFLVY VTRGVPLLML ILWCYFLVPL LTGADVPSFI TMLTTLVVYQ SCFLSEVVRS
GIVALGHGQM EAAKALGHSY PSAMRYVVLP QALYNVIPSI LSTFVSTIKD TTLGSVINVP
DLTFAANQVN NDLLTQPFQV YLILALIYYV ICWSLTHAAK RLEGSISRRR AGLSGKGEDA
PSITPQLVSE
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