Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7633 |
Symbol | |
ID | 7380281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | - |
Start bp | 568363 |
End bp | 570489 |
Gene Length | 2127 bp |
Protein Length | 708 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643641633 |
Product | reductase |
Protein accession | YP_002539930 |
Protein GI | 222102891 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCGTT CTGTTGTTGT AGGTGCATGT CCGCATGACT GTCCTGATAC CTGCTCGATC CTGACGACCG TCGAGGACGG CAAGGCGCTT GCTGTGCGGG GCAATCCAGA CCATCCCTTC ACCCGCGGCC GGCTCTGCGT GAAGGTCAAC AATTACCAGG ATCGGGTCTA TAGCGATAAG CGCCTGCTTT ACCCGATGCG GCGCGTCGGC CCTAAAGGTA GCGGCCAGTT CGTTCGAATC TCTTGGGATG ACGCGCTCGA AGAGATCGCC ATCCGCTGGA AGGATATCAT CGCGTCCCAC GGCGCTCAGG CGATATTGCC CTACAGCTAT CTTGGCACGC AGGGTATTCT CAATGGCCTC AATGTCGGCG ATCCTCTGTT CAACAAGCTG GGCGCCTCGG TGAGCGAGCG CACCTTCTGT GATTCAGGCT CATGCACGGC CTATATGATG ACGATTGGGC ATACACCGGG TGTCGATCCC GAGAGCTTCG TTCATTCCAA ATATATCATT CTCTGGGCCT GCAACACGCT CAGTACCAAT TCGCATCATT GGCCCTTCAT TGAGGAAGCC CGAAAGAGCG GTGCTAAACT TGTGGTGATC GATCCGGTGC GTACCCGCAC TGCGCGGCTT GCCGACTGGC ACATTCCGAT CCGGCCTGGC ACGGATGGGG CACTGGCCAT GGCCATGATG CACGTCATCA TCACGGAAAA TCTGGTGGAT CGGGACTATG TCGACAAGCA CACGCTGGGA TATGACGAAC TGGTTGAGCG GGTGGCGGAA TACACACCGG AATTCGCCTC TTTGGAAACC GGCATTCCCG TTGATGACAT CCTGAAACTG GCTCGTGAAT ACGCGACCAC GCCTGCGGCG GTCGTGCGGA TCGGGGTGGC GGTGGAACGT CATGCTGGCG GTGGCCAGAC GGTTCGTGCC ATTGCCTGCC TGCCAGCGTT GATCGGTGCA TGGAAACATG TCGGCGGAGG GCTTCTGCAA TTGCCGATCT GGGCCTTCCC GGTAAACTGG GGCGGGCTGA TGCGTCCCGA TCTCCAGCCT GAGAAGATGC GGGTGATCAA TTCCTGGCGC CTTGGCCAGG CGCTGACGGG CGCTCTTGAA CTGGACCCTC CGATCCGTGC CTTGTTCGTA TACAATGCCA ATCCCATGGC CATGGTCACC GAGCAGGAAA AGCTGGAACA GGGGCTGGGG CGGGAAGATC TATTCACCGT CGTCAGCGAG CATTTCATCA CCGACACCGC CAGATATGCT GATATCCTTT TGCCAGCGAC CACGCAGCTG GAACAGAAGG ACATCATGTT CTCCTGGGGC CATCTCTATC TGTCCTACAA CAATCCAGCG ATCGAACCGC TCGGCGAGGC GGTTTCAAAC ACGGAATTGT TCCGGCGCCT TGCCGGCGCA CTGGGCATCG ACGATCCCTT CTTCTTCCGC TCGGACGACG AGATGATCGA AGCATCGATG GATTGGGCAA GCCCCGTTCT TGAAGGGATC ACGCTCGATC AATTGAAACA GTCGGGATAT ATGCGATTGA ACATGCCGGC TGCCGACCGA TGGGCGCCGC ATCGTGACGG AAATTTTCCG ACACCTACGG GCAAATGCGA ATTCAAATCA ACCCTCGCCG AAAGCGGCAA TTTCGTCGCC CCGCTGTTCA GGCAGGGTTA CGGTGGCGAC CAATCGGGCG AAGCGGTCGA TCCGCTCCCG CATTACATCC GTCCCAACGA GAGCCCCGCA ACCCATCCGG TTCTGGCGCA GCAGTATCCG CTCAGCCTGA TTTCTCCGAA AAGCCACGCC TTTCTCAACT CGAATTACGG GAATCTGCCA GCGCAGATTG CGCAGGCCGG CGAGGAACAG GCGGTGCTGC TGCACCCTGA CGACGCCAGC GAACGCGGTA TCATCGCCGG AGCGCCGATC CGCGTGTTCA ATGATCGCGG AATGTTCGAG GCATTCGCGA CATTGTCGCC CGATGTCATG CGTGGCGTTG TGGTTGCTCC GTCCGGCTAC TGGCAGCGCT CCAACCGAAA GGGCGCGACC GTGCATGCCG TGACGCCGCC CGCCTATGCC GATCTCGGCC GGGCGCCGAC ATTTTCCGAT GCGCTGGTCC AGGTTGCAAT GGCCTGA
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Protein sequence | MARSVVVGAC PHDCPDTCSI LTTVEDGKAL AVRGNPDHPF TRGRLCVKVN NYQDRVYSDK RLLYPMRRVG PKGSGQFVRI SWDDALEEIA IRWKDIIASH GAQAILPYSY LGTQGILNGL NVGDPLFNKL GASVSERTFC DSGSCTAYMM TIGHTPGVDP ESFVHSKYII LWACNTLSTN SHHWPFIEEA RKSGAKLVVI DPVRTRTARL ADWHIPIRPG TDGALAMAMM HVIITENLVD RDYVDKHTLG YDELVERVAE YTPEFASLET GIPVDDILKL AREYATTPAA VVRIGVAVER HAGGGQTVRA IACLPALIGA WKHVGGGLLQ LPIWAFPVNW GGLMRPDLQP EKMRVINSWR LGQALTGALE LDPPIRALFV YNANPMAMVT EQEKLEQGLG REDLFTVVSE HFITDTARYA DILLPATTQL EQKDIMFSWG HLYLSYNNPA IEPLGEAVSN TELFRRLAGA LGIDDPFFFR SDDEMIEASM DWASPVLEGI TLDQLKQSGY MRLNMPAADR WAPHRDGNFP TPTGKCEFKS TLAESGNFVA PLFRQGYGGD QSGEAVDPLP HYIRPNESPA THPVLAQQYP LSLISPKSHA FLNSNYGNLP AQIAQAGEEQ AVLLHPDDAS ERGIIAGAPI RVFNDRGMFE AFATLSPDVM RGVVVAPSGY WQRSNRKGAT VHAVTPPAYA DLGRAPTFSD ALVQVAMA
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