| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7577 |
|---|
| Symbol | |
|---|
| ID | 7380106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011981 |
|---|
| Strand | + |
|---|
| Start bp | 523043 |
|---|
| End bp | 524014 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643641588 |
|---|
| Product | Biotin synthase-related enzyme |
|---|
| Protein accession | YP_002539885 |
|---|
| Protein GI | 222102846 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2516] Biotin synthase-related enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.146272 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTGA TGGTGCCGGT ACACACGGCA CCCGCATTCG AGAGTCCTTA CCTTGTCGAA
AAACCTGACG ACGCTGGCAA CAGCCGCATC AGTCGCGACG GCCATGTCAT CGGGGAAGTC
TCCTTCCCCT TGCGTCCACG CTTTTACGAG CGCTCGACGG CGGACGGCAT TCCCTATTCG
CAGATTGCCG TGCTTCACGG TCGCGACGTC TTGGCGACAA CCGTCCTACA GACCTGTATC
CGCTACCAGA GCCGGACGAA AACCTGTCAG TTCTGCGCCA TCGGCCAATC GCTGGCGGCT
GGCCGCACTG TTGCCCACAA GACGCCGGAG CAGCTCGCTG AAGTCGCCAA GGCCGCCGTG
GAACTGGACG GCGTCAAGCA TATGGTTATG ACCACAGGCA CACCGAAAGG CGACGACCGG
GGAGCCGCGG TGCTTGCCGA AAGCGCCCGC GCCATCAAGG CTGCCGTCAA CATTCCCATT
CAAGCACAGT GCGAGCCACC GGAAGATGAC ATCTGGTTTT CACGGATGAA AGACGCTGGT
GTGGATGCGC TGGGCATGCA TCTCGAAGTC GTGACGCCGG AAATCCGCGC CCGCATCATG
CCGGGCAAGG CGCAAGTCGG CATCGAAAAA TACATGGCCT CCTTCAAGGC TGCGGTCGAG
GTATTCGGGC GCGGACAGGT CTCCACCTAT ATGCTCGCCG GGCTTGGAGA CACACGCGAG
GCCATCCTCG ACATCTGCGA AAGACTGGTG GCGATAGGCG TCTATCCCTT CGTCGTGCCC
TTCGTGCCGA TCTCGGGAAC GCCGCTGGAA AGCCATCCCG CGCCGAAACC GGACTTCATG
CATTCGATCC TCGGCCCGCT CTCAAAAATG CTCGTAGAGA GTGGCCTGAA GGCCGTCGAT
ATCAAGGCTG GCTGCGGAAA ATGCGGTGCC TGCTCCGCCC TTTCCACCTA TGAGAGGATG
CTGACCCGAT GA
|
|---|
| Protein sequence | MTVMVPVHTA PAFESPYLVE KPDDAGNSRI SRDGHVIGEV SFPLRPRFYE RSTADGIPYS
QIAVLHGRDV LATTVLQTCI RYQSRTKTCQ FCAIGQSLAA GRTVAHKTPE QLAEVAKAAV
ELDGVKHMVM TTGTPKGDDR GAAVLAESAR AIKAAVNIPI QAQCEPPEDD IWFSRMKDAG
VDALGMHLEV VTPEIRARIM PGKAQVGIEK YMASFKAAVE VFGRGQVSTY MLAGLGDTRE
AILDICERLV AIGVYPFVVP FVPISGTPLE SHPAPKPDFM HSILGPLSKM LVESGLKAVD
IKAGCGKCGA CSALSTYERM LTR
|
|---|
| |