| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7573 |
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| Symbol | |
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| ID | 7380103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 519622 |
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| End bp | 521025 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643641585 |
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| Product | transcriptional regulator GntR family |
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| Protein accession | YP_002539882 |
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| Protein GI | 222102843 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.688585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCT GGACTCCCGA CCTTTCCCGC AGCGACGGCC CGCGTTATCT GGCGATCGCC
GACGTTATCG AGATGGATTT GAAAAGCGGC AGGCTTCTGG TGGGCGACAG GTTGCCGCCG
CAAAGAGACC TTGCCAAACG GCTGGCCATC GATTTTACGA CTGTTGCGCG CGGTTATGTC
GAGGCGCAAA AGCGTGGACT TGTGGCGACC CATGTCGGGC GCGGAACCTT CGTGACTGGC
GGTCCTGAAA AGGAACGGCG CGGCTTCGTA TCGGAGGCAG CACTGGATGC CCGACGCATG
TCGGTGGTCG ATTTTTCGAT GAATATGCCG CCGGAGCCTG ATGATCCAGA TCTTCTGGCG
CGCATGCAGG AGGGGCTGTC CGCCGTCGCG ACCAATATGA TCCCGCTCCT GCGCTATCAG
GGATTCGGCG GAGCTGGCAT GGACAAGGAG GCCGCCGCAT CATGGCTCAG TCGCCGTGGC
CTTGTTCCTT CCCAGGAGCG TATCTTCGTG ACACCCGGCG CCCATCCGGC CCTTCTGGCG
ATTTTCGGGC TTCTGGCAAA ACCGGGCGAA ATGGTGCTCT CCGAGAATAT CACCTATCCC
GGCATGCGCT CGATTGCAGC CCAGCTCCGC CTCAATCTGA CAGGCCTGCC GATGGATGCG
GACGGCATTA TCCCCGGCGC ATTCGCCGAA ATCTGTGAAA CCGCCAAGCC AAAGGCGCTG
TATCTCAATC CGACGCTTCA GAACCCGATG ACCCTCACCA TACCCGAAAA GCGACGGGAG
GAAATTTGCG CGGTTGCCCG CAAATATCAT GTTCCAATCG TCGAGGATGA TGCCTATGGG
TTCATCCCGC TTCATAGCCC GGCACCGCTT GCCGCGATGG CGCCGGATCT CACCTGGCAT
ATTGGCGGAT TGGCGAAATG CATCGGTGCG GGCCTGCGGC TTGCCTATGT TGTCGTTCCC
GACACCAAGG CAGCGTGGCC CTTTGCCAGC GCCATGCGGG CGGCAAGCGT CATGGCCTCG
CCGCTTTCAG CCGCTCTTGC CACCCGCTGG ATCGAGGATG GCACAGCCGA CAGTATCCTG
CGCTTTATCC GCACCGAGGC CGCCGCACGC CAGGCGCTCG TTGCCGAAGT GCTACCGGCG
GGCAGCTATC AAAGCGACCC CATCAGCTTC AACATCTGGC TACCCTTGAC GAATGGATGG
ACGCGCTCAA CCTTCGGCAC GCACATGCGG GCATCCGGCA TTGGCGTCGT CGCAAGTGAT
GCCTTCACTG TCGATGGCGT GGCCGAGGAA GCCGTTCGGG TTTGCCTCGG CGGCCCCATA
CGCCGGGAGA CCCTCAAGGG TGCGCTGGAA TTCATGGGCC ACGCCCTGGA GGGTTCTCCC
CAAATGGCTG GTACCTTCTT CTGA
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| Protein sequence | MKTWTPDLSR SDGPRYLAIA DVIEMDLKSG RLLVGDRLPP QRDLAKRLAI DFTTVARGYV
EAQKRGLVAT HVGRGTFVTG GPEKERRGFV SEAALDARRM SVVDFSMNMP PEPDDPDLLA
RMQEGLSAVA TNMIPLLRYQ GFGGAGMDKE AAASWLSRRG LVPSQERIFV TPGAHPALLA
IFGLLAKPGE MVLSENITYP GMRSIAAQLR LNLTGLPMDA DGIIPGAFAE ICETAKPKAL
YLNPTLQNPM TLTIPEKRRE EICAVARKYH VPIVEDDAYG FIPLHSPAPL AAMAPDLTWH
IGGLAKCIGA GLRLAYVVVP DTKAAWPFAS AMRAASVMAS PLSAALATRW IEDGTADSIL
RFIRTEAAAR QALVAEVLPA GSYQSDPISF NIWLPLTNGW TRSTFGTHMR ASGIGVVASD
AFTVDGVAEE AVRVCLGGPI RRETLKGALE FMGHALEGSP QMAGTFF
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