Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7470 |
Symbol | |
ID | 7380487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | + |
Start bp | 430710 |
End bp | 431300 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643641513 |
Product | transposase |
Protein accession | YP_002539810 |
Protein GI | 222102771 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3316] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGAGCCTTA ACCCCGGAAA ATTCCAGCTC CCGCTGGCCC AAAATCGGGG TGCACGTCAC TGCGTCCGCA TCTTTGCCAA CGAGATCCGT CGTCGGTCAT CCGGTCGGCT TGGGGAAAAG TGGCATCTCG ATGAAGCCGT TGTTTCAATC CGCGGCAAGA AGCATTGGCT GTGGCGTGCT GTGGATCAGG ACGGTTTCGT GTTGGACGTT CTCGTGCAAA GCCGCCGAAA TGCCAAGGCG GCCAGGCATC TGATGCGCCA ACTGTTGAAG GGCCAGGGTC GCGCGCCGCG GGTGATGATT ACAGACAAGC TGCGATCATA CGGCGCAGCC AAGTGGGAGC TCACGCCCGG TGTCGAGCAT CGCTCCCACA AAGGGTTGAG CAATCGGGCG GAGAATTTTC ACCAGCCAGT CCGGCGACGA GAGCGGATCA TGAAGCGCTT CAAGTCACAG CGACATCTAC AACGATTTGT CTCTATCCAC GATCCGATCG CCAACCTGTT TCACATCCCG CGCAACGACA TAACCTCCGG CCATCATCGC GAACTGCGCG CGGAGGCGAT GAGCCTGTGG GCGAAGATTG CCCGAGCATG A
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Protein sequence | MSLNPGKFQL PLAQNRGARH CVRIFANEIR RRSSGRLGEK WHLDEAVVSI RGKKHWLWRA VDQDGFVLDV LVQSRRNAKA ARHLMRQLLK GQGRAPRVMI TDKLRSYGAA KWELTPGVEH RSHKGLSNRA ENFHQPVRRR ERIMKRFKSQ RHLQRFVSIH DPIANLFHIP RNDITSGHHR ELRAEAMSLW AKIARA
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