| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7374 |
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| Symbol | |
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| ID | 7380414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 348707 |
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| End bp | 350341 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643641442 |
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| Product | ribitol kinase |
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| Protein accession | YP_002539739 |
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| Protein GI | 222102700 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1069] Ribulose kinase |
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| TIGRFAM ID | [TIGR01315] FGGY-family pentulose kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.444357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGAAG CACCTGACAC CATCGCGACC GGGCTTGAGC GCTACATTAT CGGCGTCGAC
GTCGGCACAG GCAGCGCCCG TGCCGGCCTG TTTGATCTGA GCGGTACGCT TGTAGCCGTT
GCCAAACACG ATATTGCGCT GTTTCGCGAG ACAGGGGCAA TTGCCGAGCA GTCCAGCACA
GACATCTGGG ATGCGGTCTG CACGGTTGTC CGGCAGGTTG CCGAAGGTGT GGACGATCCA
GCTCATGTCA TCGGCCTAGG CTTTGATGCC ACCTGCTCGC TGGTGGTGCT GGGTGAAGGG
GGAAAGCCAT TGCCCGTTGG CTCGTCAGAG CTTGCTGAGC GGGACATTAT CGTCTGGATG
GATCAACGTG CCGTGACGCA AGCGGAGAAA ATCAACACCA TTGGCCATGA CGTGTTGCGC
TATGTCGGCG GCAAAATCTC GCCAGAGATG GAAACGCCCA AGCTTCTCTG GCTGAAGGAA
AATCGCCCCG ACACCTTCAA AAGCGCTTGG CAGTTTTTCG ACCTTGCCGA TTTTCTCACC
TGGAAAGCAA CGGGCGATCT TGCCCGCTCC ACCTGTACCG TGACCTGCAA ATGGACCTAT
CTGGCCCATG AACAACGCTG GGACCCCAGC TATTTCCACG CCATCGGGCT GGAAGAGCTT
GCCGATGAAG GTTTTGCCCG GATCGGCCAG CAGATTGTCG AACCCGGAAC GCCGCTGGGG
CAGGGGCTAA CGGAAGCCGC CGCTGCCGCC ATGGGCCTGA GAAATGGAAC GGCCGTGGCC
GCAGGCATGA TTGATGCCCA CGCGGGCGGC ATTGGCACCG TTGGCATTGG CAGCGGCCCG
AAAGACAATA TGGCCTATGT GTTTGGCACA TCCTCTTGCA CCATGACCTC AACGGTTGAG
CCTGTGTTTG TGCCCGGTGT CTGGGGGCCA TATTATTCTG CCATGGTGCC GGGCATGTGG
CTCAATGAGG GTGGCCAGAG TGCAGCCGGT GCGGCCATTG ACCAATTGCT GGCCTTTCAC
CCGGCAGCGC CGGAGGCAGC CGCAAAGGCA CGCGAACAGG GTGTTGCGCG GCCGGTTCTG
TTGGCGCAGG CGGCAGCGGC CAAGGTCAAC GCCCTGCCCG ATGTCGTGCA TTTGGCGAAA
GGTCTGCACA TCGTGCCGGA ATTCCTCGGC AACCGCGCGC CTTTTGCCGA TCCCCACGCA
CGTGCCATCA TTGCTGGTCT GGGCATGGAT CGGGATTTTG ATAGTCTGGT TGCGCTCTAT
ATCGCGGGCC TGTGCGGCAT TGGCTATGGT CTTCGGCAAA TCATCGAGAC ACAGGCCGCA
TCGGGCGCGT TTATTGAGCG AGTGGTGATC AGCGGTGGTG CTGGTGAGAG CGATCTGGTG
CGGCAGGTGT TGGCCGATGC TTGCGGCAAG CCCGTGGTGG CTGCGGGTCT GGATGAGCCG
GTGTTGCTGG GCTCCGCGAT TCTGGGTGCT GTGGCGGGAA AGGCCTTTTC AGGTGTCAGC
CAGGCAATGG AAGCTTTAAG CGGCGTAACA AAGACCTATC ATCCGCAGGT CGGCGCTTTG
GCCAATATCC ACAAACGCAG ATACAGCCAT TTCACAACGC TACAGCAACA GGGTAGAGCG
TTACGCGACG TGTAA
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| Protein sequence | MIEAPDTIAT GLERYIIGVD VGTGSARAGL FDLSGTLVAV AKHDIALFRE TGAIAEQSST
DIWDAVCTVV RQVAEGVDDP AHVIGLGFDA TCSLVVLGEG GKPLPVGSSE LAERDIIVWM
DQRAVTQAEK INTIGHDVLR YVGGKISPEM ETPKLLWLKE NRPDTFKSAW QFFDLADFLT
WKATGDLARS TCTVTCKWTY LAHEQRWDPS YFHAIGLEEL ADEGFARIGQ QIVEPGTPLG
QGLTEAAAAA MGLRNGTAVA AGMIDAHAGG IGTVGIGSGP KDNMAYVFGT SSCTMTSTVE
PVFVPGVWGP YYSAMVPGMW LNEGGQSAAG AAIDQLLAFH PAAPEAAAKA REQGVARPVL
LAQAAAAKVN ALPDVVHLAK GLHIVPEFLG NRAPFADPHA RAIIAGLGMD RDFDSLVALY
IAGLCGIGYG LRQIIETQAA SGAFIERVVI SGGAGESDLV RQVLADACGK PVVAAGLDEP
VLLGSAILGA VAGKAFSGVS QAMEALSGVT KTYHPQVGAL ANIHKRRYSH FTTLQQQGRA
LRDV
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