Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7361 |
Symbol | rbsK |
ID | 7380569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | + |
Start bp | 337708 |
End bp | 338634 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643641432 |
Product | ribokinase |
Protein accession | YP_002539729 |
Protein GI | 222102690 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAAGG GCGTTTCGAT ACTCGGAATC TTTGTTGCCG ATACCGCCTA TCTCGCGGCC CGGCTGCCGG TCGTAGGCGA GACGATCACC GGCAGCGGCT TTTCCGTCGG GCCGGGCGGC AAGGGTTCCA ACCAGGCGGT TGCGGCAGCA AGGGCCGGGG AGGAATCGAG CGTCTCCTTC ATCTCGAAGA TCGGTTGCGA CGCGTTCGGT GATCTGGCGT TGAAGACCTA TGCGGATGCG GGTGTCCTGC CAAAACTGAC CATTATGGAC GACCAGCCCA CCGGTGCCGC GTTCATCTAT GTCAACGACA AGACTGGCGA CAATGCCATC ATTGTCTATC CAGGCGCTGC CGGAACCATT ACCATTGAGG ATGTCGAGGC GGCGCGGCAA ACCATCGAGA CCAGCGCGAT TTTCGTAACG CAGCTTGAGC AGCCCGCCGA GGCGGCCCAC CATGGGCTGA TGATCGCCCG TAAGGCTGGC GTCACCACGA TCTTCAACCC CGCCCCCGCC GAGCCGTTTC CAGACGCGAT CTATCCGCTA TGCGACTATA TCATTCCCAA CGAAACCGAA GCCGCCGCAT TGGTTGGCTT TCCGCTCGAT ACGATTGAAG ATGCGAGGCG GGCGGGGGAT GTGCTTATGG CTCGCGGTGT CGATACTGCT ATCATAACGC TGGGCAGCAG AGGCGTGTTG TTTCATAGCG CCGATGCCTC GGTGGCGGTT CCGGCCATTG CAGCCGGGCC TGTCATCGAT ACGACAGGGG CAGGGGACGC CTTCGTCGGC GGTTTTGCGG CAGCGCTTGC CGATGGACTT GCCCCGCTCG ACGCGGTCCG GTTTGGATGT GCGACGGCGG GCATCGCCGT TACCCGCCGG GGAACCGCGC CCGCCATGCC GGAGCGCAGC GAAATCGAGG CATTGCTGCG TGGCTGA
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Protein sequence | MGKGVSILGI FVADTAYLAA RLPVVGETIT GSGFSVGPGG KGSNQAVAAA RAGEESSVSF ISKIGCDAFG DLALKTYADA GVLPKLTIMD DQPTGAAFIY VNDKTGDNAI IVYPGAAGTI TIEDVEAARQ TIETSAIFVT QLEQPAEAAH HGLMIARKAG VTTIFNPAPA EPFPDAIYPL CDYIIPNETE AAALVGFPLD TIEDARRAGD VLMARGVDTA IITLGSRGVL FHSADASVAV PAIAAGPVID TTGAGDAFVG GFAAALADGL APLDAVRFGC ATAGIAVTRR GTAPAMPERS EIEALLRG
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