Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7358 |
Symbol | |
ID | 7380567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | + |
Start bp | 336280 |
End bp | 337200 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643641430 |
Product | ABC transporter membrane spanning protein |
Protein accession | YP_002539727 |
Protein GI | 222102688 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACGCA ACCCCACTCG CCATAGCGGT CCTGAAACAA GGTTTCGCCG CCCTCGCTTC ATGACGGGCA GCCTGCTGAT TTACACGGCG CTGGTGTTCT GGGCCTTTAT CTCCCTGTTT CCGATCTACT GGACCATTAC CACCTCGTTC AAGACCGCCG TCAATGTAAC CCAGGGCCAC CTCATTCCCT TCGTCGATTT TACGCCGGAC TGGAAGGGCT GGCGCTCGCT TGGCCTTTCG CCGGATACGA TATTTGTGGC CTCGACGGTG CGCGACGAAT TCATGCGGCG CTTCTTCAAC AGCGTCGTCG CCTCGGCTGG AGCCTCGTTT CTGGCTGTGG TGATCGGATC GCTGGCGGCC TATGGCCTCA GCCGGTTTTC CTACAAATTT CTCTGGTTGC GCAACAAGGA TATCTCGTTC TTCTTCCTGT CCCAGCTGAT CCTGCCGCCC GTCGTGCTCG CCATGCCGTT TCTGGTGCTC TATAAACACC TGATGCTGCT GGATACGCTG ACCGGGCTTG TCCTCGTCTA TACGCTGATG GTGCTGCCCA TTGTCATCTG GATCATGCGG GACCAGTTCG ACACGATCCC CGTCGAACTC GAGCAGGCAG CGCTGGTTGA CGGCTGCTCG ATCTGGGGCG CGTTTATGCG GATCGTCCTG CCCATCGCCC TGCCGGGAAT GGTGGCCGCC TTCATCCTTT CGGTCATTCT CTGCTGGAAC GAATATTTCT TCGCAGCGCT GCTGACCAGT TCGAACGCCA AGACGCTTCC CGTCATGGTG GCCAGCCAGA CCGGCTCGCA AGGGATCAAT TGGTGGTCCA TGGCCGCTAT CGCCACCGCC GCCATCATGC CGCTCGTTCT GGTCGGTATT TTTCTGGAGC GCTATATCGT CAAGGGCCTG ACCGCCGGTG CGGTCAAATA G
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Protein sequence | MARNPTRHSG PETRFRRPRF MTGSLLIYTA LVFWAFISLF PIYWTITTSF KTAVNVTQGH LIPFVDFTPD WKGWRSLGLS PDTIFVASTV RDEFMRRFFN SVVASAGASF LAVVIGSLAA YGLSRFSYKF LWLRNKDISF FFLSQLILPP VVLAMPFLVL YKHLMLLDTL TGLVLVYTLM VLPIVIWIMR DQFDTIPVEL EQAALVDGCS IWGAFMRIVL PIALPGMVAA FILSVILCWN EYFFAALLTS SNAKTLPVMV ASQTGSQGIN WWSMAAIATA AIMPLVLVGI FLERYIVKGL TAGAVK
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