| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7336 |
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| Symbol | |
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| ID | 7380548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 313973 |
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| End bp | 314815 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641411 |
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| Product | ABC transporter, permease protein |
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| Protein accession | YP_002539708 |
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| Protein GI | 222102669 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00810018 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCTGA TCTTGGTGCT CGGCATTTTC TACCTTTATC CGGTGTTGGA TGTGGCGCGC
CTTGCCTTCA CCAGAGCCAC CCTGCTCGGG GATGACGGTG GCTACACCAT CACAACATTG
ATCAACACGC TGACCCGCGC AGAAATTCCG CAGATCCTGT GGGTCACGCT CACCTTCACG
GCGGGTTCGG TTCTGGCGCA GCAACTGTTA GGCCTTGTGA TCGCATTGGT GGTGGTGCGG
GCAGAAAGAC GCGGTCTGTT CGGTGCGACA ATCCTGCGAA CCACGGCGCT GATTGCCTGG
GTGGTGCCGG GCATTGCTGG CGGCATTATC TGGAAAATGC TGTTTAACGA AGCGCCGTTT
GGCGGGCTGA ACAGCCTGCT TCGACTTGTG GGAGCTGGCC CCGTACAATG GCTCTCCGAT
CCCAACCTCG TGATGTGGTC GGTGGTGTTG TCGAATGTCT GGCGCGGAAC CGCCTTTTCC
ATGGTGGTGA TGTATGCGGC CATCAAGGCG ATTGATCCGG TGCTTTATGA GGCCGCGGCG
GTGGATGGGG CGCGGGCCGA TCAGCGGCTG CGCTATGTCA CTCTGCCGCA GCTAAAATCG
GCCATTCTGG TCAATCTGAT TTTGATCACC ATTCAGACGC TCAACACCTT CGATGCGATC
ATCTCCCTCA CCGGCGGCGG ACCGGGACGG GTGACAGAGG TACTGTCGCT CTACACGTTC
AATGTGGTGT TTCGCAATTA TGATCTGGCG GCGGGCGCTG CCCTGTCCAT CCTGATGCTG
GTAATCTCGC TGACGCTTGC CTTGATCTAT GCCGCCTTCC TGCCAAAGGG AGATGACCAA
TGA
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| Protein sequence | MPLILVLGIF YLYPVLDVAR LAFTRATLLG DDGGYTITTL INTLTRAEIP QILWVTLTFT
AGSVLAQQLL GLVIALVVVR AERRGLFGAT ILRTTALIAW VVPGIAGGII WKMLFNEAPF
GGLNSLLRLV GAGPVQWLSD PNLVMWSVVL SNVWRGTAFS MVVMYAAIKA IDPVLYEAAA
VDGARADQRL RYVTLPQLKS AILVNLILIT IQTLNTFDAI ISLTGGGPGR VTEVLSLYTF
NVVFRNYDLA AGAALSILML VISLTLALIY AAFLPKGDDQ
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