| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7335 |
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| Symbol | |
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| ID | 7380547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 313134 |
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| End bp | 313976 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643641410 |
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| Product | ABC transporter membrane spanning protein (sugar) |
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| Protein accession | YP_002539707 |
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| Protein GI | 222102668 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0398278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCC GCACAAGTGA GCGCCTCGGC GATCTGCTGA GCTATATTTT TATGGCCATT
ACCTTTGCTT TTTTCGCATG GCCGCTGCTG TGGCTTTTGT CTTTGGCGCT CAGAACCCGC
AAGGAAGTGT TTCTGGGTGT CACTCGCTTC ATTCCCAAAG CACCGACACT GGATAATTTT
GCGATGATCC TGTCCTCGGA CAAGTTCATT TCTTACCTTT GGAATGCGCT GAAACTCTCC
TGCCTGTCAG CGGCAGGCTG CCTGATCGTG GCCTTGCCTG CGGCCTATGC CTTTTCGCGC
TTTCAGTTCA AGGGCAAGGG CGCGTGGATG ATGGCGCTGC TATCGGTGCA GATGATCTCC
CCGCTGGTGA TCATGGTGCC GCTCTACCGC TACATGGCGG CCATGGGCCT GCTGGACAGC
CATTTCGGCA CCACCATGGT CTATGTGGCC CTTGCCGTTC CGGTCTCCAC CTGGATTTTG
AAAGGCTCGA TCGACGGCAT TCCCAAAACC CTTGATGAAG CGGCGATGAT GGATGGTTGC
ACCCGGTTTG GTGTGTTTAT CCGCGTTATC CTGCCGCTGT CCACGCCGGG CATCGCTTCG
GCCTTCATCA TTGCCGTGAT CAGTGGCTGG TCGCAATTTC TGGTGCCGTT CCTGCTGATT
ACCAAGGAAT CCCTCACCCC GATTGGCGTC GGGATTTTTC AATATGCCGG TACGCAAAAT
GACTCTTCCA TCCAACTTCT CGCGGCGGCC TGCCTTGTAT CAGTTGTGCC TGCCATCATT
GCCTTCCTCT CGCTCCAGCG CCTGATATTG GGCGCAATGA CCGCCGGAGC CGTGAAGGGC
TGA
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| Protein sequence | MKTRTSERLG DLLSYIFMAI TFAFFAWPLL WLLSLALRTR KEVFLGVTRF IPKAPTLDNF
AMILSSDKFI SYLWNALKLS CLSAAGCLIV ALPAAYAFSR FQFKGKGAWM MALLSVQMIS
PLVIMVPLYR YMAAMGLLDS HFGTTMVYVA LAVPVSTWIL KGSIDGIPKT LDEAAMMDGC
TRFGVFIRVI LPLSTPGIAS AFIIAVISGW SQFLVPFLLI TKESLTPIGV GIFQYAGTQN
DSSIQLLAAA CLVSVVPAII AFLSLQRLIL GAMTAGAVKG
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