Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7327 |
Symbol | dppB |
ID | 7380540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | - |
Start bp | 301750 |
End bp | 302670 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643641403 |
Product | ABC transporter membrane spanning protein (dipeptide) |
Protein accession | YP_002539700 |
Protein GI | 222102661 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCAATT ATTTTCTCAA GCGCCTGTTC GGGCTGCTGC CCACACTTCT GATCGTTGCC GTTCTGGTGT TTCTGTTTGT GCATATGCTG CCGGGTGATC CGGCGCGCCT TGCGGCAGGG CAGGATGCGG ACGAGCAGAC CGTGGCGCTG GTGCGCAGCG AACTGGGCCT CGACAAGCCC CTACCCCAGC AATTTGTCGA GTATTTCACA CGAATGTTGC ATGGCGACCT TGGGGTGTCG ATCCGCACCC ATCGCCCGGT GTCTGTTGAA ATTGGCGAGC GCTTCATGCC CACCATGCTG CTGACGCTGA CCAGCATGAT CTGGTCGGTG TCCGTTGGCA TGATCATTGG CGTCTTTTCT GCCGTGTTTC GCAACCGCTG GCCGGATAGA TTGGGCATGA CCGTGGCCGT GTCTGGCATT TCCTTTCCGG CCTTTGCGCT GGGCATGTTG CTGATGCAGA TTTTCTCGGT CTGGCTCGGA TGGCTGCCCA CCGTGGGGGC CGATAGCTGG CGGCATTACA TCCTGCCATC GATAACGCTG GGCGCAGGCG TTGCCGCTGT CATGGCCCGC TTTACCCGAG CCGCCTTTGT AGATGTGATT CAGGAAGATT TTGTGCGCAC CGCCCGCGCC AAGGGGCTGA ATGAAAAAGT GGTGATTGCC AAACATTGCC TGCGCAACGC GCTGATCCCG ATTGTCACCA TGATGGGCCT GCAATTCGGC TTTCTGCTGG GCGGCTCCAT TGTGGTGGAG GCGGTGTTCA ACTGGCCGGG TGTTGGCCGT TTGCTGGTCG ATGCGGTGAA CCAGCGGGAT TATCCGGTAA TTCAGGCCCT CGTGCTGATG TTCTCGCTGG AATTCATCCT GATCAATCTT GTCGTGGATC TGCTCTACGG CGTCATCAAT CCGACAATCC GTTATAAATG A
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Protein sequence | MFNYFLKRLF GLLPTLLIVA VLVFLFVHML PGDPARLAAG QDADEQTVAL VRSELGLDKP LPQQFVEYFT RMLHGDLGVS IRTHRPVSVE IGERFMPTML LTLTSMIWSV SVGMIIGVFS AVFRNRWPDR LGMTVAVSGI SFPAFALGML LMQIFSVWLG WLPTVGADSW RHYILPSITL GAGVAAVMAR FTRAAFVDVI QEDFVRTARA KGLNEKVVIA KHCLRNALIP IVTMMGLQFG FLLGGSIVVE AVFNWPGVGR LLVDAVNQRD YPVIQALVLM FSLEFILINL VVDLLYGVIN PTIRYK
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