| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7286 |
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| Symbol | |
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| ID | 7380511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 245080 |
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| End bp | 245622 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643641375 |
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| Product | sigma factor |
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| Protein accession | YP_002539672 |
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| Protein GI | 222102633 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAGAT CTTCCTCCTC GTCCCTTGTC TGGGACACCG TTGACAGCAG CGAGTTGCTC
AATCGAGCCA TGGAAGCACA CTATGCTGAT ATTACCAATG CGGTGCGGCG CCGGGGACAC
CCGAGTTCTA CGGCCCGCGA CGTGGTGCAC GATCTCTACG TGAAGCTCGC CGCCAAACCG
GAGGTTCTCC TGAACAAGCG GTCGATCAAG GCCTTTCTCT GCCGTGCCGC CATCAATCTC
GGCATTGACC GCCAACGCAG GGAAACGAAG GAAGCCCGGC TGTTCTCAGG ATCGGAGCGT
GAGGCCCTCT CGGCGGCAAG CACCGGGCAC GCGCCGGACC ACACTCTGGA AATAGAAGCG
CGACTTGCAG CCCTTCGGGA AGCAATTGCG GAACTGCCGG AGAGGCGACG TGTCGTCTTC
ATTCTCCATC GCCTTTATCA TCTGACACCA GACCAGATCA GCACCAGGCT CAACATCTCC
AGAAACATGG TCGACCGGCA CCTGCGGCGT GCGTTTGCCC ATTGCCTTGA CCGGATTCTC
TAG
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| Protein sequence | MSRSSSSSLV WDTVDSSELL NRAMEAHYAD ITNAVRRRGH PSSTARDVVH DLYVKLAAKP
EVLLNKRSIK AFLCRAAINL GIDRQRRETK EARLFSGSER EALSAASTGH APDHTLEIEA
RLAALREAIA ELPERRRVVF ILHRLYHLTP DQISTRLNIS RNMVDRHLRR AFAHCLDRIL
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