| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7283 |
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| Symbol | |
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| ID | 7380509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 240618 |
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| End bp | 243674 |
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| Gene Length | 3057 bp |
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| Protein Length | 1018 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643641373 |
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| Product | Acr family transporter |
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| Protein accession | YP_002539670 |
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| Protein GI | 222102631 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATTTCT CCTCTTGGTC TATTCGCAAC CCTGTCCCCC CGTTGCTGCT ATTTGCATTG
TTGACGGCCT GTGGCCTTTG GGCGTTCAAT CGTCTCGACA TACAAAACTT CCCGGATATG
GATCTTCCAA CCATCAATAT CAGCGCGACG CTGGACGGCG CGGCGGCAGC CCAGCTCGAA
ACGGAAGTGG CCCGCAAGAT CGAGGACAAA CTGACCGGCC TGAGCAAGCT GGATTCGGTG
ACCACGACGA TCACTGATGG TTCAGTCAGC ATTTCAGTCG CATTTGAGGT TGGGAAAGAC
ACGCAAGCCG CATTGGACGA GGTGAAAAGC GCAGTCGATC AGGCGAAAAG CGACCTGCCA
CAAGATATGG ATGATCCAAC GGTCTCAAAG CAATCGTTGA ACTCTTCTCC TCTGACTACC
TTCGTGGTGC ATTCCGACAA ATTGGACGAT GCGGAACTGT CGTGGTTCAT CGATAACGAC
ATGTCAAAAG CGCTGATGGC TGTCAAAGGC GTGGGTGAAG TTGGCCGATT GGGCGGCATC
GATCGAGAGA TCAGGGTAGA GCTCAACTCT AACATGCTCG ACAGCCTGGG CTTAACCGCC
AATGACGTGA ATACCCAGCT TGAAGCCGTG CAAACCTATC TGTCTGGCGG CAAAGGACGA
ATTGGTGGTG AAAGCCAGTC TGTGCGTACC GTGGTTGCGG CAGAAACTGC CGATGAACTG
CGCGCAATGC CTGTCCCGCT GCCAAAAGGC AGTTGGGTCA GGCTGGACGA ACTTGGCACA
GTGACCGATT CCCAAAGCGA TTTGACCTCG CTTGCTTATC TCAATGGTAA ACCCGTCATT
GCCGCCCAGA TCAAACGGTC TAAGGGCTAT TCAGATATCG CCGTCACCGA CGATGTCCGC
ACCGCAATGA AAGCCTTTGC CGCTGCCAAT CCGCAGGTGA CAATCGAAGA AGCCTACAAC
ACGATTGTTC CGACCGAGCA AAATTATGAA TCGTCGATGG ACATGATCTA CGAGGGTGCG
GTCATCGCGG TCCTTGTGGT CTGGATGTTC CTGCGCGATT GGCGTGCAAC ACTTCTGGCG
GCTGTCGCTT TGCCGCTGTC GATTATACCG ACATTCCTCG CCATGTATTT TTGTGGCTAT
ACGCTGAACA CGATCACGCT TTTGGCGCTG TCCTTGGTCG TTGGCATTCT TGTCGACGAT
GCGATCGTCG AAATCGAGAA TATTGAACGA CACCTTAGAA TGGGCAAAAG CCCCTTCGAT
GCTGCAATGG AAGCGGCAAA CGAAATTGGT TTGGCGGTTA TCGCCACAAC CTTCACGTTG
GTCGCGGTGT TTTTGCCGAC CGCCTTCATG GGTGGGGTGG TCGGTATCAT TTTCAAGCAA
TTTGGCGTCA CGGCCTCTGT GGCTGTTCTT GCTTCTCTTT TGGTCGCTCG GTTGGTCACG
CCGATGATGG CGGCTTACAT ATTGAAGCCT GGCACTGCAA AAGAAGAAGA AGACGGTCGT
TTGATGCGGT CCTATCTCTG GCTTGTGAAA GGGGCGCTCC GGCGTCGCTG GATACCGGTT
CTGGGGACTG TCGGATTTTT AGCATTCACG CTTCTGCTCC TGAGCCATTT GTCGACCGGC
TTTTTTCCGG CATCTGATGA TGCGCAAACC AAGGTCACCA TCACGACGCC GACGGGATCG
ACGATTGAGA CAACGGATGA AGCGTCTCGA AAGGCGTCCG AGATCATCGC CAAGGTTGAT
CATGTTACCT CGGTGTTTCA GGCAACGGGT ACGGCCTCCA CTGGAGGCGG TGCAAGCAGT
ACAACGACAT CCAGCACCAA TAGCGCCACG ATTGTTGTCA ACCTGACGCC AATTGGCGAG
CGCGATGTCA AGCAGTCGCA GATCGAAGCG GATTTACGAA AAGCTTTGGA AAAAGTGCCC
GGTCTCCGCC TTGAAACAGG CACTGGCGGG AATGGCACGC AGCTCACTCT GACCTTGTCA
GGTGATGACT CCGAAGTTCT GGAAAAGGCA GCCGCCAGCC TCGAGACGGG TCTGCGTACA
TTGTCAGGCA TTGGCAATGT GACATCCTCT GCCGCCATGC AGTCGCCAGA GATCATCATC
AAACCGGATT TGGCGAAAGC CGCGTCATTG GGTGTGACAT CCAAGGCGAT TGCTCAGGCT
ATTCGCGTGG CGACGGCAGG AGCGTATGAT ACCGCGCTGT CCAAGCTTAA TCTTCCTGAA
CGTCAGATCA ATATCCGGGT CTTGCTGGAC ACAACAAACC GTCAGTCCCT TGACGCAATA
TCTCTTATCC CTGTTGAGGG TAGCGCGGGC AACGTTGCCC TTGGAGCAAT CGCTGATATT
TCAATTGGGT CCAGCCCAAG CGAAATCAAT CGGCTCGACA GATCACGCAA TGTCACACTC
ACGATTGAAC TGAATGGCAG GAGCTTGTCC GCAGTCACCG CTGAGGCCGC CCAATTGCCA
AGCTATAAAA ACTTGCCACA AGGGGTAAAA TTTGTCGAAC AGGGTGAATT GAAGCGTCAA
ACTGAGTTGT TCAACAGTTT CGCGACGGCG ATAGCGATCG GCATTTTCTG CATCTACGCT
GTTCTAGTCC TCCTCTTCCA TGATTTCCTG CAGCCGGTCA CGATCCTGAT GGCAATTCCG
CTGGCGCTTG GCGGGGCCCT CTTGCCGCTT GTGCTCACCG GTACCAGCTT CTCGATGCCT
GCGGTGATTG GTCTGCTCCT TTTGATCGGA ATCGTCTCCA AAAACTCCAT TCTGCTTGTG
GAATATGCGA TTGAAGCACG CCGGGGAGGC ATGTCGCGTT ATGACGCGCT TGTTGATGCG
TGTCACAAAC GCGCGCGTCC GATCATTATG ACCACAATCG CAATGGCTGG CGGCATGGCA
CCAGCAGCGC TCAGCCTCGT CGCCGGCGAT TCTAGCTTTC GTCAACCCAT GGGGATCGTC
GTGATTGGTG GGTTGTTGAC CTCAACCTTC TTGAGCCTCC TGGTCATCCC TGTCGTGTTC
ACATTTTTAG ATGATCTTCT GGTCTGGCTT AAAGCGCGGT TCGGAGTGAC CTCGTAA
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| Protein sequence | MNFSSWSIRN PVPPLLLFAL LTACGLWAFN RLDIQNFPDM DLPTINISAT LDGAAAAQLE
TEVARKIEDK LTGLSKLDSV TTTITDGSVS ISVAFEVGKD TQAALDEVKS AVDQAKSDLP
QDMDDPTVSK QSLNSSPLTT FVVHSDKLDD AELSWFIDND MSKALMAVKG VGEVGRLGGI
DREIRVELNS NMLDSLGLTA NDVNTQLEAV QTYLSGGKGR IGGESQSVRT VVAAETADEL
RAMPVPLPKG SWVRLDELGT VTDSQSDLTS LAYLNGKPVI AAQIKRSKGY SDIAVTDDVR
TAMKAFAAAN PQVTIEEAYN TIVPTEQNYE SSMDMIYEGA VIAVLVVWMF LRDWRATLLA
AVALPLSIIP TFLAMYFCGY TLNTITLLAL SLVVGILVDD AIVEIENIER HLRMGKSPFD
AAMEAANEIG LAVIATTFTL VAVFLPTAFM GGVVGIIFKQ FGVTASVAVL ASLLVARLVT
PMMAAYILKP GTAKEEEDGR LMRSYLWLVK GALRRRWIPV LGTVGFLAFT LLLLSHLSTG
FFPASDDAQT KVTITTPTGS TIETTDEASR KASEIIAKVD HVTSVFQATG TASTGGGASS
TTTSSTNSAT IVVNLTPIGE RDVKQSQIEA DLRKALEKVP GLRLETGTGG NGTQLTLTLS
GDDSEVLEKA AASLETGLRT LSGIGNVTSS AAMQSPEIII KPDLAKAASL GVTSKAIAQA
IRVATAGAYD TALSKLNLPE RQINIRVLLD TTNRQSLDAI SLIPVEGSAG NVALGAIADI
SIGSSPSEIN RLDRSRNVTL TIELNGRSLS AVTAEAAQLP SYKNLPQGVK FVEQGELKRQ
TELFNSFATA IAIGIFCIYA VLVLLFHDFL QPVTILMAIP LALGGALLPL VLTGTSFSMP
AVIGLLLLIG IVSKNSILLV EYAIEARRGG MSRYDALVDA CHKRARPIIM TTIAMAGGMA
PAALSLVAGD SSFRQPMGIV VIGGLLTSTF LSLLVIPVVF TFLDDLLVWL KARFGVTS
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