| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7255 |
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| Symbol | |
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| ID | 7380401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 212176 |
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| End bp | 213027 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643641347 |
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| Product | ABC transporter substrate binding protein (glycine-betaine) |
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| Protein accession | YP_002539644 |
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| Protein GI | 222102605 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.999285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTTC TGTGGAAGGC ACTTTGCGCG GCGGCGATGG TCGGAATGAC CGCCCTGTCT
GCACATGCGG AAGAAAAAAC CGTCACCATC GGCACGATGT CTTGGGAAGA CCTCACCCCG
ATCACCGGCA TCACCAAGAA GGTGCTCGAA GATTCCGGCT ACACCGTGAA AGTCGTACCC
TTCTCTGAAT GGGGCATCGC CTATGCCGCA TTGAGCAAGG GCGATGTCCA GATTTTGGCG
TCGCAAACCG ATTATGTCGC GCAGGATTAC TGGAACAAGA ACAAGAAGCG TCTGGAAAAA
ATCTCGCCGG TCTCGCACGG CCTGTATCAG GCGATCGCTG TTCCGAAATA CGTCCCCATC
GACTCCGTCG AACAGTTGAA CGAAAATGCC GACAAGTTCG GCGGCAAGAT CATCGGCATC
GAGCCTGGCT CGGGCCTGAT GAAGGATGCG GCAAACGCCG TCAAGGACTA CGGCCTCAAG
CTTCAGCTCG TCGAGGGCAG CACGGCTGCG ATGACGGCGG CTCTCAAGTC TGCATCCGAC
CGCAAGGAAT GGATTGCCGT GACGATCTGG GAACCATCAT GGATGGCACA GAAATACGAC
GTCAAATTCC TCAAGGACCC CAAGGGCGTG TTCCCGCCAG CCCAGAGCTA CTACTGGATC
GGGCAGAAGG GCTTCTCGGC TCAGAACCCG CATGCGCGTG AAGTGATTGC CAGCGTCTAT
GTGCCGCTTG CCGACATCGC CGCAATCAAC AGTGCGGTTA ACGACGGTAA GACCATGGAT
GAGGCCATCA AGAGCTGGAC TGACAGCCAT GCCGATCTCC TGAAGCGCTG GGAAAACATC
AAGTCTGAAT AA
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| Protein sequence | MKFLWKALCA AAMVGMTALS AHAEEKTVTI GTMSWEDLTP ITGITKKVLE DSGYTVKVVP
FSEWGIAYAA LSKGDVQILA SQTDYVAQDY WNKNKKRLEK ISPVSHGLYQ AIAVPKYVPI
DSVEQLNENA DKFGGKIIGI EPGSGLMKDA ANAVKDYGLK LQLVEGSTAA MTAALKSASD
RKEWIAVTIW EPSWMAQKYD VKFLKDPKGV FPPAQSYYWI GQKGFSAQNP HAREVIASVY
VPLADIAAIN SAVNDGKTMD EAIKSWTDSH ADLLKRWENI KSE
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