Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7191 |
Symbol | |
ID | 7380351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | - |
Start bp | 156158 |
End bp | 157852 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643641299 |
Product | ABC transporter nucleotide binding/ATPase protein |
Protein accession | YP_002539596 |
Protein GI | 222102557 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.453207 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCTGT CTTTATCCAA AACAAAACCC GTTCTGCGTA TCAATAGTCT GAGCGTGGAT TTTCCCGGTT TTGATGGCAA TTTTCGTGCA GTCGATGACC TATCGCTCAC CATTGCCCGT GGCGAAGTGC TGGGCGTGAT TGGCGAATCC GGCGCTGGCA AATCCATGAC CGGAGCTGCG ATCATTGGCC TGATTGATCC CCCCGGCCGC ATCACCTCTG GCGAAATCCA CCTGCAAGGC GAGCGGATTG ATAACCTCGG TGACAAAGCG CTGGAAACTT TGCGCGGACG GCGGATCGGC ACCGTGTTTC AAGACCCGCT GGTCAGCCTC AATCCGCTTT ACACCATTGG TCAACAGCTG ATTGAAACCA TTCGCCGCCA CCTGCCGCTG GATCAGGGGC AGGCGCGGCA AAGGGCGATA GACCTGTTGC GTGAGGTGGG TATTGATGAG CCAGCACGGC GGCTGGATGC CTATCCGCAT GAATTTTCCG GTGGAATGCG CCAACGGGTG GTGATTGCGC TGGCCGTGGC CGCCGATCCC GACCTGCTGA TTGCCGATGA GCCGACCTCG GCATTGGATG TGTCCGTGCA GGCGCAGATT ATTGCGCTGC TTAAGTCTCT TTGCCAGCGG CGCGGGCTGG CTGTTCTGCT GATCACCCAC GACATGGGCG TGGTCGCGGA AATCGCCAAC CGCGTTGTGG TGATGCACAA GGGCCGGATT GTGGAAAGCG GGTCCGTGGC TGAGGTGATT GGCAGTCCCA AGCATGATTA CACCCGGGCG CTGATTGCCG CCATCCCTTC GATTAGGCGT AAAAACACGC GGGCCTCGGT GGCATCCAAA GGGGATTTGG TCAAGGTGGA AGGCTTGATC CGCGATTTTG CCCTGCCGGG TGGCGGTGGC CTGCCGTTTT TCAGCAAAAA TCGAAAGCAG CGCAGTCTTC GCGCCGTCAA TGATGTCAGT TTTTCGATTG GCGAGGGCCA GACCTTTGCG CTGGTGGGCG AATCCGGTTC TGGCAAGTCC ACCATTGCCC GCATTGTCGT GGGCCTTCTC GGCGCACAAG CGGGCAAGGT CACCATCGGC GGTACGGTGT TGGGGCAGGA TAAGGCCCCC GCCCTGAAAG GCGCTGTGCA GATGATCTTT CAAGATCCCT ATGCCAGCCT CAACAGCCGT TGGCGGATTG GTGACATTAT TGCCGAACCC ATCCGAACCC TTGGCCTGGA AACAGACAAT CGCGTGATTG AGCAGCGTGT TACAGATCTT CTGGAAAAAG TCCGGCTTGA TCCCGATGCG CGCAGCCGCT TTCCCCATGA GTTTTCCGGC GGGCAACGCC AGCGCATAGC CATTGCTCGC GCCCTTGCCA GCCGCCCGCG CTTCATTGTG TGTGATGAAC CAACCTCGGC GCTGGATGTG TCGGTGCAGG CACAAGTGCT GGAGTTGATG GCTAGCCTGC AAGCAGAATT CGGCCTGACC TATCTGTTGA TCAGCCATAA TCTGGCTGTT GTGCGGCAAA TGGCAGACCG GGTTGGCGTG TTGAAAAACG GTGTTCTGGT GGAGGAAGGG CCTGTCGAGG AGGTGTTCGA ACGTCCTCAG CATGACTACA CCCGAATGTT AATCGCAGCC GTCCCCGACA TCGATGATAG TGTCGTGCCA TCAACAGATG TCAAACAACG TCCAAAAGTC TTATCCGATC ATTGA
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Protein sequence | MSLSLSKTKP VLRINSLSVD FPGFDGNFRA VDDLSLTIAR GEVLGVIGES GAGKSMTGAA IIGLIDPPGR ITSGEIHLQG ERIDNLGDKA LETLRGRRIG TVFQDPLVSL NPLYTIGQQL IETIRRHLPL DQGQARQRAI DLLREVGIDE PARRLDAYPH EFSGGMRQRV VIALAVAADP DLLIADEPTS ALDVSVQAQI IALLKSLCQR RGLAVLLITH DMGVVAEIAN RVVVMHKGRI VESGSVAEVI GSPKHDYTRA LIAAIPSIRR KNTRASVASK GDLVKVEGLI RDFALPGGGG LPFFSKNRKQ RSLRAVNDVS FSIGEGQTFA LVGESGSGKS TIARIVVGLL GAQAGKVTIG GTVLGQDKAP ALKGAVQMIF QDPYASLNSR WRIGDIIAEP IRTLGLETDN RVIEQRVTDL LEKVRLDPDA RSRFPHEFSG GQRQRIAIAR ALASRPRFIV CDEPTSALDV SVQAQVLELM ASLQAEFGLT YLLISHNLAV VRQMADRVGV LKNGVLVEEG PVEEVFERPQ HDYTRMLIAA VPDIDDSVVP STDVKQRPKV LSDH
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