| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7187 |
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| Symbol | |
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| ID | 7380347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 151930 |
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| End bp | 152871 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643641295 |
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| Product | ABC transporter nucleotide binding/ATPase protein (oligopeptide) |
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| Protein accession | YP_002539592 |
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| Protein GI | 222102553 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTCT TGTCGGTGCG TAATCTTTCC ACCCAATATG CCGGCGCACG GGGAACCGTG
CGGGCTGTGG ATGATGTGTC GCTGGAGATT GAAGCCGGTG AAACCGTGGC GCTGGTGGGC
GAATCCGGCT GCGGCAAATC TTCGCTTGGC AAATCGCTGA TGCGGCTGGT GGAGCCATCC
TCTGGCCAGA TCACCTTTCA GGGCGGCGAT GTCACGGCCA TGCCAGCCAA TGAGTTACGC
GGCATTCGCC GCCGCATTCA GATGATCTTT CAAGACCCGT TTGCCTCGCT CAACCCACGC
CAGACCATCC GCACCATTTT GACCACGCCG CTGAAAGTGC ATGGCATTGG TGATGGTAAA
CGCCGCCGCG AGATTGTTGA GGCGATTATT GAACAGGTGG GATTGCCAGC CGATTCACTG
GATCGCTACC CGCATGAATT TTCCGGCGGC CAGCGCCAAC GCATCGGAAT TGCCCGCGCC
ATCATTCTGG AGCCAGAGCT GGTGGTGTGT GATGAGCCGG TCTCCGCACT GGACCTGTCC
ATTCAGGCAC AGATTCTCAA TCTGCTGGTG GAGCTGAAGA GCCGCCTGTC GCTGTCCTAT
CTGTTTGTTT CCCATGATCT ATCGGTGGTG CGCTATTTTT CAGATCGGGT GCTGGTGATG
TATCTGGGCA AGATCGTTGA AAGTGCGCCC ACGGCAGAGC TATGGGCCAA CCCGAGACAT
CCCTATACCC GCGCACTTCT GGCAGCTGTG CCAGACCCGG CGAGGCGCAA GCAGGCAGCC
CCGATTTCCG GCGATTTGCC AAGCCCGCAC AATCCGCCCT CTGGCTGTCG CTTTCACACC
CGCTGCCCGC TGGCGACAGA TCTCTGTCGT GAACAGGCAC CGGATTATCA ACTGTTTGGT
CAAGCCCATG CCGTGGCCTG CCATCACGCC AACGAACACT GA
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| Protein sequence | MTLLSVRNLS TQYAGARGTV RAVDDVSLEI EAGETVALVG ESGCGKSSLG KSLMRLVEPS
SGQITFQGGD VTAMPANELR GIRRRIQMIF QDPFASLNPR QTIRTILTTP LKVHGIGDGK
RRREIVEAII EQVGLPADSL DRYPHEFSGG QRQRIGIARA IILEPELVVC DEPVSALDLS
IQAQILNLLV ELKSRLSLSY LFVSHDLSVV RYFSDRVLVM YLGKIVESAP TAELWANPRH
PYTRALLAAV PDPARRKQAA PISGDLPSPH NPPSGCRFHT RCPLATDLCR EQAPDYQLFG
QAHAVACHHA NEH
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