| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7161 |
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| Symbol | |
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| ID | 7380327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 129417 |
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| End bp | 130217 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643641275 |
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| Product | ABC transporter nucleotide binding/ATPase protein (branched chain amino acid) |
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| Protein accession | YP_002539572 |
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| Protein GI | 222102533 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTCAT TTGCGCTTGA GCCAACTGAG AAACAGCCGG AAGTGACTGA TATTGTTGCA
GATAATCTTC TGGACGTGTC CGGCATTGAA GTTGTCTATG GCGGTGCCAT TCTGGCGGTT
GCAGATGTTT CGCTCACCGT TGGCGCAGGC GAGATTGTGG CATTGCTTGG TGCCAATGGT
GCCGGCAAAA GCACGGTTTT AAAGGCGATT TCCGGTCTGG TGAGCGCTGA CAGGGCAACC
GTGCGTAAAG GCCACATCCG CTTTGATGAC AGTGATATTC TCGGCTCTGC TGCCAATCAT
CTCGCAGCAC GGGGCATTGT CCATGTGCTG GAAGGCCGCC ATGTGTTTTC TCATCTGACG
GTTGAGGAAA ATCTACAGGC AGGCGCATTC CTGCACAGGC CTCGCCGCCG CGATCTGTTG
CGGCAGATTG AGGAGGTCTA CGATTGGTTT CCGAGGCTCA AGGAAAAGCG GAAGACACTG
GCTGGTCTGA CATCCGGCGG TGAGCAGCAG ATGCTGGCCA TTGGCCGCGC TCTTCTCACC
CAGCCCCGGC TGGTGTTGCT GGACGAGCCA TCCATGGGTC TGGCCCCGCG CATTGTGCAG
GAAATTTTCG AGATCATCGG CAGGCTCAAC CGTGAAAAAG GGGTGGCCTT TCTGCTTGCC
GAGCAAAACG CCGCCTTGTC GCTGGCCCAT TCCAGCCGCG CTTACATTCT TGAAAGCGGC
AAGGTGGCTT TGGTGGGAAC CTCTGCTGAG CTGACTGCGC GCGATGATCT TCACCACATC
TATCTCGGAG CGTCCGCTTA A
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| Protein sequence | MMSFALEPTE KQPEVTDIVA DNLLDVSGIE VVYGGAILAV ADVSLTVGAG EIVALLGANG
AGKSTVLKAI SGLVSADRAT VRKGHIRFDD SDILGSAANH LAARGIVHVL EGRHVFSHLT
VEENLQAGAF LHRPRRRDLL RQIEEVYDWF PRLKEKRKTL AGLTSGGEQQ MLAIGRALLT
QPRLVLLDEP SMGLAPRIVQ EIFEIIGRLN REKGVAFLLA EQNAALSLAH SSRAYILESG
KVALVGTSAE LTARDDLHHI YLGASA
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