| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7120 |
|---|
| Symbol | |
|---|
| ID | 7380165 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011981 |
|---|
| Strand | - |
|---|
| Start bp | 95854 |
|---|
| End bp | 96180 |
|---|
| Gene Length | 327 bp |
|---|
| Protein Length | 108 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643641243 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_002539540 |
|---|
| Protein GI | 222102501 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTCA AGGTAACGAA CTGGGCCGAG TATGATGCGT GTCTGCGACA ACGTGGCAGT
CTAACCCTTT GGGTGACGTC GGAGGTTGTT GACGGTTGGG CGGCGCAACG ACGCAAGACA
AGAGGTGGCC AGCAGCGCTA TTCCGATCTG GCGATTGAGA CTGCCCTGAC CCTGGGCCTC
GTATTCGGCT TACGCCTGCG CCAGGCGGAG CGCTTTCTGA TGTCAGTGCT GCGGCTGATG
GGACTGGATC TCGCCGTTCC GGACCATACG ACGCTAAGCC GTCGGGCAAA AAATTGGCAA
TCGCCGGACA AACGGCAATG TCATTGA
|
|---|
| Protein sequence | MKFKVTNWAE YDACLRQRGS LTLWVTSEVV DGWAAQRRKT RGGQQRYSDL AIETALTLGL
VFGLRLRQAE RFLMSVLRLM GLDLAVPDHT TLSRRAKNWQ SPDKRQCH
|
|---|
| |