Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7103 |
Symbol | |
ID | 7380155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | - |
Start bp | 87943 |
End bp | 88314 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643641233 |
Product | Transposase and inactivated derivatives IS5 family |
Protein accession | YP_002539530 |
Protein GI | 222102491 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGGAGGAAA AGCACGGTGC CAAATTCCGC AGGGGTTGGC GCAAACTGCA CCTGGCGCTG GATGCCAACA CTGGCGACAT CATCGCACAC GTCATGAACA ATCAAGAGGT CGGCGACGGT TCGCAGGTGG GGCCGCTACT CGAGCAGATC GATATGCCGA TCTGGCAGTT CACGGCTGAT GGAGCCTATG ACGGTGAGAC GAACTACGAC ACCGTCCCAA GCCACAGCGC CGATGCTGCT GTGGTTATCC CGCTGCCCGC CAATGCGGTG GAACGCCAGC ACGACGATCC CCCCAGTCAA CGAGACCGTC CGCAATCGCA TGCTGGCCTG CGCGCACTCG AAATCCGTCG GTGTAGAAAA GCTACCGCAT AG
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Protein sequence | MEEKHGAKFR RGWRKLHLAL DANTGDIIAH VMNNQEVGDG SQVGPLLEQI DMPIWQFTAD GAYDGETNYD TVPSHSADAA VVIPLPANAV ERQHDDPPSQ RDRPQSHAGL RALEIRRCRK ATA
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