Gene Avi_7103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_7103 
Symbol 
ID7380155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011981 
Strand
Start bp87943 
End bp88314 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content60% 
IMG OID643641233 
ProductTransposase and inactivated derivatives IS5 family 
Protein accessionYP_002539530 
Protein GI222102491 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGGAGGAAA AGCACGGTGC CAAATTCCGC AGGGGTTGGC GCAAACTGCA CCTGGCGCTG 
GATGCCAACA CTGGCGACAT CATCGCACAC GTCATGAACA ATCAAGAGGT CGGCGACGGT
TCGCAGGTGG GGCCGCTACT CGAGCAGATC GATATGCCGA TCTGGCAGTT CACGGCTGAT
GGAGCCTATG ACGGTGAGAC GAACTACGAC ACCGTCCCAA GCCACAGCGC CGATGCTGCT
GTGGTTATCC CGCTGCCCGC CAATGCGGTG GAACGCCAGC ACGACGATCC CCCCAGTCAA
CGAGACCGTC CGCAATCGCA TGCTGGCCTG CGCGCACTCG AAATCCGTCG GTGTAGAAAA
GCTACCGCAT AG
 
Protein sequence
MEEKHGAKFR RGWRKLHLAL DANTGDIIAH VMNNQEVGDG SQVGPLLEQI DMPIWQFTAD 
GAYDGETNYD TVPSHSADAA VVIPLPANAV ERQHDDPPSQ RDRPQSHAGL RALEIRRCRK
ATA