Gene Avi_7085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_7085 
Symbol 
ID7380141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011981 
Strand- 
Start bp76152 
End bp76820 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content55% 
IMG OID643641220 
Producttransposase 
Protein accessionYP_002539517 
Protein GI222102478 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0314847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTGGGCA CAGCCAGCGC CGCAACACTG GCCGCAAGCG TCGATGTCCG GTGCCTGCGT 
TTGCGAAACG ACGTGGACCT TCGGTTCAAG TGCGCCATTT TCAGGGTGAG GTTATCCTTT 
GGGCGGTACG CTGGTACTGT CATTAAGGTT CGCGGACGAT GGACTTATCT CTACCGGGCT 
GTCGACAAAC TCGGCAACAC GATTGATTTT TATCTTTCCC CGACCCGCAA TGCCAAAGCG 
GCGAAGCGCT TTCTCGACAA AGCCTTAAAT GACCTGAAGG ATTGGGAGAC ACCGACCGTC 
ATCAACGCCG ACAAGGCACC GACCTACCGT ATCGCGCTTT CGCAACTGAA GACTAAAGGC 
AAATACCCCG CAGAGTTCAT GCACCGGCAG GTCAAATATC TGAACACCGT CATTGAGGCT 
GATCACGGCA AGCTGAAGCA GTTGATCAGA TCGGTGAGAG GGTTCAAAAC GCTGAAAACC 
GCCTACGCCA CGATCAAGGG TTTTGAGGTC ATGCGCGCTG TGCGCAAAGG TCAGGCAGCC 
ATTTTCAACC TGACGGGCGA CATTTGTGGA GAAGCAAGGA TCGATGAGCG TACTTTCGGT 
ATCGGGCCAA ACGCTCTCAC GGAAGCCTCG GCACTGCTCG CCCAGAACCG AGAAAGTCAG 
GCCGCTTGA
 
Protein sequence
MLGTASAATL AASVDVRCLR LRNDVDLRFK CAIFRVRLSF GRYAGTVIKV RGRWTYLYRA 
VDKLGNTIDF YLSPTRNAKA AKRFLDKALN DLKDWETPTV INADKAPTYR IALSQLKTKG 
KYPAEFMHRQ VKYLNTVIEA DHGKLKQLIR SVRGFKTLKT AYATIKGFEV MRAVRKGQAA 
IFNLTGDICG EARIDERTFG IGPNALTEAS ALLAQNRESQ AA