Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7081 |
Symbol | |
ID | 7380137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | + |
Start bp | 71843 |
End bp | 72802 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643641216 |
Product | hypothetical protein |
Protein accession | YP_002539513 |
Protein GI | 222102474 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATGA TGAGAACAGC GATCTTGGCG GCCAGCAGTT TGCTTGCAAC GATTGGCTCG GCCCATGCCG AGTGGCCGAA GGATCGACCC ATTCAGATGA TCGTTGCTTT CGCGCCGGGC GGCAGCACAG ACGTCATGGC GCGTGCCATG CAGCCCTATC TTGAAAAGGA ACTGGGCGCA GACATCGTCA TCGAAAATCG CCCCGGCGCA TCGGGCGAAA TCGCCTATAC GGCGTTGGCA AAGGCCAAGC CGGATGGCTA CACCTTCTCC TACATCAACA CGCCCGGTTT CTTGTCCATG CAGGTGCAGA GAAAGCTCGG CTATGATCCA AAGACCATCA AGCCGATTGC CCGTATCGTA GACGACCCGG CGGCTATCGT CGTTCCTGCG GCGTCAGAAA TCAAAACCAT CGCGCAATTC ATCGAAGCAG CGAAGGCAAA GCCCGGTGCG GTTTCGTTCG GCTCATCCGG CATCGGCACG GATGATCACC TTGCCATCAT CATTCTCGGC GCTGAAGCCG GCACCAAGAT CACGCATATT CCGTTCAACG GTGCTGGCGA AACCCGCACC GCGATCCTTG GCGCACAGGT GACCGGCGGC GGTCTCAACG TTAGCGAGTT CGGCGGAAAC GATACGTCCG GCCTGCGGAT GATCAATACC TTCGGCAAGG AGCGCTCGCC TGAGCTTCCA GACGTGCCGA CAGCCATCGA ATCCGGTTTC AATGTCGAGA TGACATCCGA GCGCGGCATC GCTGCTCCCC GCGAAGTGCC GGCTGAAATC GCCGACCGTT TCGCTGCCGC CGTCAAGGCA ACGCTGGATA ACCCTGAGTT CCAGAAGCAG GCCAAGCAGA TGGCGCTGCC ACTGGCTTAT CTCAGCGGTC CTGACTGGGA AAAGGAAATG CCAACGCGTC TCGCTCGCTT CCAGAAGATC TGGGACACTA CTCCTTGGGT GCAGCAATGA
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Protein sequence | MNMMRTAILA ASSLLATIGS AHAEWPKDRP IQMIVAFAPG GSTDVMARAM QPYLEKELGA DIVIENRPGA SGEIAYTALA KAKPDGYTFS YINTPGFLSM QVQRKLGYDP KTIKPIARIV DDPAAIVVPA ASEIKTIAQF IEAAKAKPGA VSFGSSGIGT DDHLAIIILG AEAGTKITHI PFNGAGETRT AILGAQVTGG GLNVSEFGGN DTSGLRMINT FGKERSPELP DVPTAIESGF NVEMTSERGI AAPREVPAEI ADRFAAAVKA TLDNPEFQKQ AKQMALPLAY LSGPDWEKEM PTRLARFQKI WDTTPWVQQ
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