| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7054 |
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| Symbol | |
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| ID | 7380116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 47162 |
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| End bp | 48556 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643641195 |
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| Product | hypothetical protein |
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| Protein accession | YP_002539492 |
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| Protein GI | 222102453 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00922196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTATC CATCGCAAGA GGCAAGCCGC GAGACGCGAT TGGGTCTGAT CATCTCGAAA
TATCCTGATG TTTGCCGCTC GCCGCATGCC TGCGTGCCAT ACAATATTAT AGCCTACCAA
TCCGACGCAG CCGGCACGGC CGCGACAGTG CATATGACTG GGCAGCGCGC CCACAAGCAA
AATTCGGTTG TCACGAAATG CTTCGGCGAC GAGCCGGGCG TGGGTCTTGG CGTCAAATCG
AATACTGTTG GCTCTGTGTG CCATCGCAAA ACTCATTCGC GCAATGTCCG TATCGAAGGC
CAATGGGCCA CCCGCGACAC CGACGAATGG TATATGAACA ACAAGAATAC CGTCGGTAAA
CTGGTTTGGT ACACGGGGTC GAAGGATTTT AAGCCAACGC CTCCTTTAGA ACAACCGTCC
GCTAGCCGGA GCCAGGAAGG TCTGGTCATG AGCGATGCGA CGCCCATGAC CTTCGAACCT
GGCAAGGAAT ACGCTTTCAA CGATACGACC GGACAATTTA CAAAACCCGC CCAAACCCAG
CCGACCGATA CGAAGCAGAC AGCGTCGGAT GGATCGCGAT GGTGGACCAT CATCAACGGG
CTCAAAAACA TCCGATCGAT CAATCCGAGC GGTGCAGGCG CTATGGAGCT GATGGGGGCG
GCTGACTATT ATCTGAAGCA GAACGTTAAT GAGCCGACGG ACTGGTTGAG TCATGGCTTT
CTAAAGACGC AACCAACTCA CACGAATACT CCTATCGATA ATGGTGTCCC AACCAACACG
GCCCCAACCG AACCTGAAAA GAAGCAGGAA CTTGAGGAAA AGCAAACGAC GGCGCCGGCC
AATGGGCGGA CGGACGGAAA CACCAAGATC ACGGGGCAAC AGAAGCGCAA AAGGGAGTGC
CGGTGCGTCA CGGGCGCCTA TGATGATATC AAGAATGTCT GCGGTGTCGA ATGTGGTTCT
GATTATCAGG CGCACCATAT CGTGCCGGAT TACACACTGC GTTACGGTAA TCGTGCAGAG
GCCGAGAAAG GGCAGAAACG AATTCCTGGA TTGCCAACGT TCGGACAGGG ACCAGCGATC
TGCTTAAAAG GTTATTCTGC CGATGCAGGC AGTGAGCATG GGTTGGCACA TCTAGCGGAT
GTACAAGTTA ATGCTTTGGG CTCCGGTTGG AGTACGCCGC AGGGAACAGC AGATATTTCG
AGCATTACTG AAATTTCACG AAATGCTGCC GTCGCCGCGA CTGGAGGGGA ATGTGAAGAC
GAAATCAATA CGGCACTAGA TGCCCAGCCT TCTCTAGATT CCAATATTCT AGGAAGAACG
ACCATTATGC CACCTGCTGA AGGAACGGAC CCTTATAATC TGCTGTCGAC CGGTGCTCAC
GCGACAGTTC ACTGA
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| Protein sequence | MSYPSQEASR ETRLGLIISK YPDVCRSPHA CVPYNIIAYQ SDAAGTAATV HMTGQRAHKQ
NSVVTKCFGD EPGVGLGVKS NTVGSVCHRK THSRNVRIEG QWATRDTDEW YMNNKNTVGK
LVWYTGSKDF KPTPPLEQPS ASRSQEGLVM SDATPMTFEP GKEYAFNDTT GQFTKPAQTQ
PTDTKQTASD GSRWWTIING LKNIRSINPS GAGAMELMGA ADYYLKQNVN EPTDWLSHGF
LKTQPTHTNT PIDNGVPTNT APTEPEKKQE LEEKQTTAPA NGRTDGNTKI TGQQKRKREC
RCVTGAYDDI KNVCGVECGS DYQAHHIVPD YTLRYGNRAE AEKGQKRIPG LPTFGQGPAI
CLKGYSADAG SEHGLAHLAD VQVNALGSGW STPQGTADIS SITEISRNAA VAATGGECED
EINTALDAQP SLDSNILGRT TIMPPAEGTD PYNLLSTGAH ATVH
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