| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7034 |
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| Symbol | |
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| ID | 7380230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 31828 |
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| End bp | 33282 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643641178 |
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| Product | hypothetical cytosolic protein |
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| Protein accession | YP_002539475 |
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| Protein GI | 222102436 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGATCC ACAATCCCTG CGCCCTGCTC GACCGCCTGC TGCAGGAACC GAACGAAAGC
ACATGGCTCG AATTCAAGGT CAACAACAAG GATCCACGTG AGATCGGGGA ATACGTCTCA
GCGCTTGCAA ATGCCGCAAT GCTAGCAGGG CGTGACCGCG CATTTATGGT CTTCGGCATT
CGGGACAAAA CGAGGGAACG GGTCGGTACC GACCTGCGCC TGCAGCAACT CAAGCATGGC
AACGAAGACT TTACCAATTG GCTTAGCCGC ATGATTGAAC CGAGGATCAT GCTCGATGTC
GTGGATGTCG AATGTGACGG GCTGACTTAT TCCCTCATAG CCATCGAGCC ATCCTATGAG
CGGCCGGTCA AATTCAGCGA TGCGGAATTC ATCCGAATTG GAGAAAACAA AAAGAAACTC
TCCGATTTTC CCGAACACGA GAGATCTCTT TGGATTGCAA CTGGCCGTCG GCGCTTCGAG
AGTGCAGTCG CTGTTTCGAA CGCCACCGCC GATGACATAT TCGCCCAACT CGATCCCGAA
CCCCTCTTCG AGTTGACAGG CGATCCCCGC CCGAAAAATC CGGACGAAAT TATTCGAAAA
ATGATTGAGT ATGGATTCCT GCTGGATAAC CTGGAAGGGC GCTACGACAT CACCAATCTT
GGCGCGATCA TGCTTGCGCG CGATGTCACG CTGTTTCCGT CCATTGCCGG TAAGGCAGTA
CGCATTATCA AATATATCGG ACGCGACAAA TCCAAATCGG ATTTCGAGCA GGAAGGTAAA
AAAGGCTATG CAGTTGGCTT CACTGGGATG ATGAGGTTCC TAATGGAACG TCTGCCCAAG
GAAGAACGAT ACATCAATGG CGTCCGGCGC ATGGTGCCGC ACTTCCCGGA AACAGCAATC
CGCGAGGTGA TTGCCAATGC CATGATCCAC CAGGACTTCA TAGTCGGCGG CGTCGGCCCG
GTTGTCGAGA TCTACGAAAA CCGTATCGAG GTAACCAATC CTGGAAACTC ACTGATAGCC
ACAGACCGAA TTCTTGACGA GAGACGCTCG CGCAATGAAA AACTCGCATC GACAATGCGC
GCATTCGGTC TTTGTGAGGA GCGTGGCGGC GGTCTGGACA AGACGCTGAT CGAAATAGAA
GCTGATCACC TGCCCGCGCC AGATTTCATT TCCTCTGAAA ACTCGATGCG GGTGGTTTTG
TTCGCTCCGC GTGCATTTGC CCAGATGTCA AAAGCAGAGA AGATGCGGGC CTGCTTTTTC
CATTGCGTTC TTCGATGGTT GACCCACGAC TACATGAGCA ACGCGACCCT GCGAGAACGC
TTCTCGCTGG CCCCAGAGGA CTATCAGGCC GTCTCCGCCA TAATTGCCGA GTCGATCAAG
CTCGGGCGGA TTGCACCGGC CGATCCCGAC CAAGGAAAGA GAAATGCGCG ATACGTGCCC
TACTGGGCAG TTTAA
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| Protein sequence | MPIHNPCALL DRLLQEPNES TWLEFKVNNK DPREIGEYVS ALANAAMLAG RDRAFMVFGI
RDKTRERVGT DLRLQQLKHG NEDFTNWLSR MIEPRIMLDV VDVECDGLTY SLIAIEPSYE
RPVKFSDAEF IRIGENKKKL SDFPEHERSL WIATGRRRFE SAVAVSNATA DDIFAQLDPE
PLFELTGDPR PKNPDEIIRK MIEYGFLLDN LEGRYDITNL GAIMLARDVT LFPSIAGKAV
RIIKYIGRDK SKSDFEQEGK KGYAVGFTGM MRFLMERLPK EERYINGVRR MVPHFPETAI
REVIANAMIH QDFIVGGVGP VVEIYENRIE VTNPGNSLIA TDRILDERRS RNEKLASTMR
AFGLCEERGG GLDKTLIEIE ADHLPAPDFI SSENSMRVVL FAPRAFAQMS KAEKMRACFF
HCVLRWLTHD YMSNATLRER FSLAPEDYQA VSAIIAESIK LGRIAPADPD QGKRNARYVP
YWAV
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