| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7020 |
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| Symbol | |
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| ID | 7380218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 20632 |
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| End bp | 21648 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643641168 |
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| Product | ABC transporter nucleotide binding/ATPase protein (oligopeptide) |
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| Protein accession | YP_002539465 |
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| Protein GI | 222102426 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACTC AACCTTCCTC CACCGCCGCG CTTCTGACCG TCTCCGATCT GAACACGACC
TTCGACACGG CGCGCGGCCT CGTCAACAGT GTGGATGGAG TATCGTTTTC CATTGCTCCG
GGTAAGACGC TCGGTCTCGT GGGCGAATCC GGTTCGGGTA AATCAGTGAC CAGCCTCTCG
TTGATGCGCC TCATCGAACG CAGTAACGGC CGGATCGAAG GCGGCTCCAT GCTGTTTAAA
AGCCGAAACG GCGAGGTCGA TCTTGTGGGG CTGCCGGAAA AGGAGATGCG GAGCATTCGC
GGCAACGAAA TCGCGATGGT ATTCCAAGAG CCGATGACCA GTCTCGATCC TGTCTGGCGG
GTCGGCAAGC AAATCGCCGA GGCCGTCCGG CTACACCAGG GGGCCAGCAA GGCCGAGGCA
CGCCACCGTG CCATCGAAAT GCTGCGTCTG GTTGGCATTC CAGCCCCCGA GAAGCGTGTC
GATGACTATC CCCACCAGAT GTCGGGCGGA ATGCGCCAGC GCGTGATGAT CGCAATTGCG
CTGTCCTGTC GCCCATCACT GCTGATTGCA GATGAGCCGA CAACGGCGCT AGACGTGACG
ATCCAGGCGC AGATTATCGA CCTTATCAAG CGCCTGCAGG TCGAGATCGG CATGTCTGTT
CTTTTCATCA CCCACAATAT GGGCGTGATC GCGCAGGTCG CTGATCACGT GGCTGTCATG
TATGCCGGGC AGATCGTGGA GCATGGCCCG GTGCGACGGA TTTTTTCCAA TCCCCGCCAT
CCCTACACGA TCGGCCTGTT GAATTCGATC CCGCGCAAAG GGGCTGTGGG CAGCGACGGT
CGCCTGCAAG CGATCGGAGG CATTCCCCCC AGTCCCTTCG ACCTTCCGAC GGGCTGTCGC
TTCGCGCCTC GTTGCACATT CGCGACGGAC GACTGTTCCC GCGCCAACCC ACCGTTTGAA
AGCGTGGAGG CTGATCACAT CGTCCGCTGC TTGCACTGGA AGGAGGTCGC GCCATGA
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| Protein sequence | MNTQPSSTAA LLTVSDLNTT FDTARGLVNS VDGVSFSIAP GKTLGLVGES GSGKSVTSLS
LMRLIERSNG RIEGGSMLFK SRNGEVDLVG LPEKEMRSIR GNEIAMVFQE PMTSLDPVWR
VGKQIAEAVR LHQGASKAEA RHRAIEMLRL VGIPAPEKRV DDYPHQMSGG MRQRVMIAIA
LSCRPSLLIA DEPTTALDVT IQAQIIDLIK RLQVEIGMSV LFITHNMGVI AQVADHVAVM
YAGQIVEHGP VRRIFSNPRH PYTIGLLNSI PRKGAVGSDG RLQAIGGIPP SPFDLPTGCR
FAPRCTFATD DCSRANPPFE SVEADHIVRC LHWKEVAP
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