Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_6262 |
Symbol | |
ID | 7381166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 1253825 |
End bp | 1254616 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643649724 |
Product | hypothetical protein |
Protein accession | YP_002547948 |
Protein GI | 222107157 |
COG category | [S] Function unknown |
COG ID | [COG4420] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGCTAT GCATCAGGGG GCCGGGGCGG CAATTTTGTC GCGCCCGGTC TTTTCTGTCG GAGCCCTGCG TGTCCAACAT TTCTCCCGCG TCCAGCCATC AGTCGCATCA ATGCTGCCTC TGTCATAAAA CCGTTCCGCC AAGGCATTTG CATGCCGTCA ACTCGATGCG ATCTTCGTTG ATAGAATTGA TCGAGGCGCA ATGCGGCCCG TTGGCCGCCG ATGCCCGGAT CTGCGACGAC GACCTGTCAG CATTGCGGCG CCAGCGGGTC GAAAAACTGC TTCAGGAAGA ACGCGGTGAG CTTTCGGACC TTGACCGACG CGTGATCGCC GATCTTGGCC GCGATGTTTC CACGGTTCAG ACCGCTGCGG CGGAGATCGA ACGGCCCACC CGGTTTGGCG ATCGGGCCTC GGACGCCGTC GCCTCTTTTG GCGGCTCGTG GCGATTCATC ATCATTTTCG CCGTCATCCT CGTCACCTGG ATGGCAATCA ACTCCATCGG GCTATTTCTT CAGCCTTTTG ACCCCTATCC CTACATCCTC CTGAACCTGC TGCTGTCCTG TGTCGCCGCA ATGCAGGCGC CAATAATCAT GATGAGCCAG AAGCGCCAGG AGGAAAAGGA TAGGCAGCGG GCGGAAAACG ATTACATGAT CAACTTGCGC GCCGAACTCG AAATCCGCCA ATTGCATGAA AAGATCGACC ATCAGATGGC CCATCAATGG GCGCGCTTGG CCGAATTGCA GCAGATACAG ATCGACCTGC TCGAGGGACG GATTTCCAAA AAAGATATAT GA
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Protein sequence | MKLCIRGPGR QFCRARSFLS EPCVSNISPA SSHQSHQCCL CHKTVPPRHL HAVNSMRSSL IELIEAQCGP LAADARICDD DLSALRRQRV EKLLQEERGE LSDLDRRVIA DLGRDVSTVQ TAAAEIERPT RFGDRASDAV ASFGGSWRFI IIFAVILVTW MAINSIGLFL QPFDPYPYIL LNLLLSCVAA MQAPIIMMSQ KRQEEKDRQR AENDYMINLR AELEIRQLHE KIDHQMAHQW ARLAELQQIQ IDLLEGRISK KDI
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