| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6220 |
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| Symbol | |
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| ID | 7381268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 1216088 |
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| End bp | 1216804 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643649690 |
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| Product | hypothetical protein |
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| Protein accession | YP_002547914 |
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| Protein GI | 222107123 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.107819 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACCTG TGAATAAACA TTATCCCTTC GGCGCGCAGG CGCAGGCGGG GGCCTTGTTC
GACCAGGGCC TGCGTCAGCA TATGCTACGC GTCTACAACT ATATGGGCCT TGGCCTGGTT
ATCACCGGCC TTGTGGCGTT TATCGTCGGT TCGACGCCAG CGCTTTACGT GCCGATTTTC
CAATCGCCGC TGAAATGGGT GGTGATGCTG GCGCCGCTCG CCTTCGTATT TTTCTTCTCC
TTCCGCATCC AGACCATGTC GGCCAGTGCC GCGCAGATGG CGTTCTGGGC GTTTTGTGCG
GTCATGGGCC TGTCGATGGC GTCGGTCTTC CTGGTCTTTA CCGGCACCAG CATCGCCCGG
ACATTCTTCA TCGCCGCAAC CATGTTCGGC TCCATGAGCC TCTACGGCTA TACCACGAAG
CGTGACCTGT CGAAATTCGG CTCCTTCCTG ATGATGGGCC TGATCGGCGT GGTCATCGCC
TCCATCGTCA ACATTTTCTT AGGCTCCAGC GCGCTGCAAT TTGCGATCTC GGTGATCGGT
ATCCTGGTTT TCGTCGGCCT GACGGCTTGG GACACCCAGA ATATCAAGGA GCAATATGCC
GAAAATATCG ATCAGGAATC GCGCCAGAAA CTGGCGGTAT TCGGCGCGCT GTCGCTTTAC
CTGAATTTCG TCAACATCTT CCAGCTTCTG CTGAATTTCA CCGGTGAACG TGAATAG
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| Protein sequence | MEPVNKHYPF GAQAQAGALF DQGLRQHMLR VYNYMGLGLV ITGLVAFIVG STPALYVPIF
QSPLKWVVML APLAFVFFFS FRIQTMSASA AQMAFWAFCA VMGLSMASVF LVFTGTSIAR
TFFIAATMFG SMSLYGYTTK RDLSKFGSFL MMGLIGVVIA SIVNIFLGSS ALQFAISVIG
ILVFVGLTAW DTQNIKEQYA ENIDQESRQK LAVFGALSLY LNFVNIFQLL LNFTGERE
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