Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_6163 |
Symbol | |
ID | 7380804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 1177459 |
End bp | 1178076 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643649648 |
Product | hypothetical protein |
Protein accession | YP_002547872 |
Protein GI | 222107081 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03360] type VI secretion-associated protein, VC_A0118 family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.689253 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAGC GGATTATGAT GATGGCAACG ATACTTGCCG GTTGGGCGCT TTGGCCGATG TATGGGTACG CAAAAACGGG GGTAGATTGC GCAAAAGTTA CGGACGCGGG GGAGCGTTTG TTGTGCTATG ACGCCGTCTT TAAGTCCGAG ACGGTCACCA AAAACAATAG TGCGTCCAAC TGGGCGATTG TGATTGATAA GTCGAAGATC GATGATAGTC AGACCGTTGT TCTCGGCTCT GATTCCGATG AAGAATTTGA CGATAAATTT TCGCTCAAGA AGATCAACGC CACCCTTCTA TTGAGGTGCT TCGAGGGGAA AACGTCGATT CTTATCGGCG CCGGTAATCA TTTCCTTGCG GATATTCAGA GCTTTGGAAA AGTTACCATA AGGCTGGATA GTGGCGCACC GTTTACGCAG GGCTTCACAT CGACAACCGA TCATAAATGG CTAGGTTTAT TTGGCGGAAC AGCTGTTCCG TTGATTAAGA AGATCATGGC GGCAAACGTC ATTGTTCTTC GATTTACCCC ATTTAACGGC GCGCCGATGG TTGCTACTTT CCAGGTGGCA GGTTTGCAAA ATGACATTGC GCCTCTGCGC CAAGCTTGCC GCTGGTAG
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Protein sequence | MIKRIMMMAT ILAGWALWPM YGYAKTGVDC AKVTDAGERL LCYDAVFKSE TVTKNNSASN WAIVIDKSKI DDSQTVVLGS DSDEEFDDKF SLKKINATLL LRCFEGKTSI LIGAGNHFLA DIQSFGKVTI RLDSGAPFTQ GFTSTTDHKW LGLFGGTAVP LIKKIMAANV IVLRFTPFNG APMVATFQVA GLQNDIAPLR QACRW
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