Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_6144 |
Symbol | |
ID | 7380789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 1164497 |
End bp | 1165798 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643649632 |
Product | Signal transduction histidine kinase |
Protein accession | YP_002547857 |
Protein GI | 222107066 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTCGGC TTTTCTGGCG TTTTTTCGTC ATTGTCTGGC TGACAATCAC GCTGACAACC ATGCTGGGCA TATCGCTTCC ACGGTTCAAC GGCCAGCTGC CACCGCATAT GCGCATCGCT GAGGTGCAGA ACGAGATCAT TGCCGCGCAA ATCGCCGAGA TGCTCCAACG GGTCGGGCCG CAGGAGACAC AGGCGTTTAT CCGCAGCATA ACACCCAAAG GAGACGATGG GCATTTCCAA CTCCAGGCAG TGCCGGCAGC GGCCCCGCAA ACCTGCGCCA AGGATCAATT TCCAGGCAGC ATTGCCATAT CCTACGCCAA CCAATGCTAT ACCCTCACTA TCGATGAATC GTCTATCAGC AATGACTGGC CACTTGTGTT GCCTTGGCTG ATCGGCCTTG TCGCAAGCCT GTTTTCCGCT TACCTGCTGA CGAAATACCT GCTGACACCC ATTGAGCGGC TTCGCCATGG GCTGAAAATG CTGGCAGAAG GCCACTTCAG CATCCGCATC CACGATCCTG TCAAAAATCG AAAGGATGAA ATCGGAATTC TGACACAGCA TTTCGATATC AGCGCCATGC GCCTACAGGA ACTGCATGAG AGCCGAGAAC GACTGTTTCA TGATATTTCC CACGAACTAC GCTCACCCTT GTCACGCCTG CAAGCCGTTA CCGGTATCCT GAGGAAGAAC CCAGGGCGCC TACCCGGCCT GCTGGATCGC ATGGATCATG AAATCGAGCG GCTGGACAGG CTGGTCGGTG AGATCCTGAC CATGGCCAGG CTGTCCTCCA AGACAGATGA AGAAAATCAG CTCCTGGTTA TCGATATTCT CGATATTCTC GATGAGATTG TTCAGGACGC GACTTTTGAA GCGCAGGAAA AAGCCGTATC AATTGACTTT CAGCGGAGTG GCAGTTTTGT CGCCGCTGTC AATGGAGAGC TTATCTATCG CGCCATCGAG AATGTCTTGC GAAACGCAAT CAAATATACC GGAGAAGCGA CAGTAATCCG GATTTCGGCA ACCGTTTCAC CGAATGGCCT GACACTCACC TTCACGGACG AAGGTCCTGG CGTCAAAGAA GATGACCTTG AAAGTATTTT TCGCCCCTTT ATCAGTTCAG GCAGCAGCGG CAGTGCCTCC GGATACGGTC TTGGCCTGGC AATTGCCAAG ACGGCCGTCG AACGGCACGG CGGCAAGGTC TTTGCCGGCA ATGTCAAGCC GAAAGGCTTG CGGATCACCA TGATATTGCC TGGCGATAGC GACACACGGT CGGAATGCCA CAACGCTATG CGGCAGACCT GA
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Protein sequence | MPRLFWRFFV IVWLTITLTT MLGISLPRFN GQLPPHMRIA EVQNEIIAAQ IAEMLQRVGP QETQAFIRSI TPKGDDGHFQ LQAVPAAAPQ TCAKDQFPGS IAISYANQCY TLTIDESSIS NDWPLVLPWL IGLVASLFSA YLLTKYLLTP IERLRHGLKM LAEGHFSIRI HDPVKNRKDE IGILTQHFDI SAMRLQELHE SRERLFHDIS HELRSPLSRL QAVTGILRKN PGRLPGLLDR MDHEIERLDR LVGEILTMAR LSSKTDEENQ LLVIDILDIL DEIVQDATFE AQEKAVSIDF QRSGSFVAAV NGELIYRAIE NVLRNAIKYT GEATVIRISA TVSPNGLTLT FTDEGPGVKE DDLESIFRPF ISSGSSGSAS GYGLGLAIAK TAVERHGGKV FAGNVKPKGL RITMILPGDS DTRSECHNAM RQT
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