Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_6084 |
Symbol | |
ID | 7380738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 1106540 |
End bp | 1107376 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643649581 |
Product | hydrolase |
Protein accession | YP_002547806 |
Protein GI | 222107015 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGATGG CAGCAATGCG TGGCACGGCC CCATCGCCAT TTCCGGCGGT CAAGCGCCAC ATTACCCCTG ATGGAACCGC TTATGTGGAG CAAGGCGAGG GTGAGCCGCT TGTGCTGGTG CATGGGGTCG GTATGCGGCT TGAGGCCTGG TGGCCGCAGA TAGAAAGCCT TTCCGTTAGC CATCGGGTGA TCGCCGTCGA TATGCCGGGC CATGGCCAGA GTGTTGCCTT GCCGAAAGGC AGTGAGCTGC CGGATTTTGT TGCCTGGCTT GACCGGTTCC TGGAGGAAAT CAACCTTGGG TCGGTCAACT TGGCCGGTCA TTCGATGGGC GCGTTGATTG CAGGTGGTGC CGTCGCCAGC TTTCCGCAGA AAATCCGGCG CGTGGCGCTG GTCAATGGTG TCTATCGGCG TGATGCGTCG GCCAAGGCGG CTGTTCTTGC TCGGGCAGAG TCGATTGCCG CTGACGGGAT CGATATTGAA GGGCCGTTGA AGCGTTGGTT CGACAGCGAT GCCGTCAGTC TGGCCGCCCG CGCCCTGACC GAGCAATGCC TGCGGCAGAT GAATATCGAT GCCTATGCCA CGGCCTATCG TGCCTTTGCC AATGGGGATG AAACCTACGC CGACTACTGG CCGCAGGTTT CCTGTCCGGC GCTGTTCCTG ACGGGTGCCG GTGATCCAAA CTCGACGGCT GAAATGGCTG AGGCCATGGC GCGTCAGGCG CAGCAGGGTG TTGCGAGGAT CGTTCCCGGC CATCGCCATA TGGTCAATCT TACGGCACCG CAAGAGGTGC ATGACATCAT GGCCGCGTGG CTTGCTTTGC CGGAGGCACA TCCATGA
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Protein sequence | MEMAAMRGTA PSPFPAVKRH ITPDGTAYVE QGEGEPLVLV HGVGMRLEAW WPQIESLSVS HRVIAVDMPG HGQSVALPKG SELPDFVAWL DRFLEEINLG SVNLAGHSMG ALIAGGAVAS FPQKIRRVAL VNGVYRRDAS AKAAVLARAE SIAADGIDIE GPLKRWFDSD AVSLAARALT EQCLRQMNID AYATAYRAFA NGDETYADYW PQVSCPALFL TGAGDPNSTA EMAEAMARQA QQGVARIVPG HRHMVNLTAP QEVHDIMAAW LALPEAHP
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