| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6050 |
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| Symbol | impC |
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| ID | 7380876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 1069546 |
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| End bp | 1071027 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649553 |
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| Product | hypothetical protein |
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| Protein accession | YP_002547778 |
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| Protein GI | 222106987 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCTG AAAGCGTTTT GAAGCCGAAT GAACCGACCG CCGCCACCGA GGAACAGGGG
CTGTTGTCGA AAGTCGTTGC CGCCACCCGT CAGACGGAGC CGGACCGCGC CCGCAACCTT
TTGAGCACCC TGACGGATCA GGCCCTGAAA GGTACTGTAA AATACGACCG CAACCTGACG
GTCACCTTGA ACAATGCCAT TGCCGAGCTG GACAAGGTGA TTTCCACCCA GCTCGCCGCC
ATTATGCAAT CGCCGGAATT TACCAAGCTG GAAGGCAGCT GGCGAGGGCT GAACTATCTG
GTCAAGAATT CTGAAACCAG CGTCAACCTG AAAATCCGGG TGCTGAACGC CTCCAAGCGC
GAACTGTCGA AAGACCTGGC CAAAGCGGTC GAATTCGACC AGTCGCGGCT GTTCAAGTCG
ATTTATGAAG ACGAATTCGG CACGCCTGGC GGTGAACCGA TGGGTGCTGT CGTCGGCGAT
TACGAATTCG ATAATTCTTT CGAGGACGTC CAATTGCTTC AGGGCGTGTC CTCGATTGCC
GCCGCAGCCT TCGCACCGTT TGTCTCGGCA GCAAGCCCGC GCATGTTTGG CTTTGACGAT
TTCCGGGAAT TGTCGCGGCC CCGCGATCTC GAAAAGATCT TCGAGACCGT GGAATATGCG
AAATGGCGCA GCTTCCGCGA AAGCGACGAT TCGCGTTTCG TCACGCTGGC CCTTCCCCGG
GTGTTGGCGC GTATGCCCTA TAGCCCGAAA ACCAGCCAGA TCGACGAGTT CGGTTTTGAT
GAAACCCTGG GCGAGGCAAG CGGCGAGCTG CATCACGACA GCTATTGCTG GATGAATGCC
GCCTACGTCA TGGGGACACG CCTCACCGAA GCCTTTGCGA AGAACGGCTG GTGCACAGCC
ATCCGTGGCG CAGAAAACGG CGGCAAGGTG GAAAACCTGC CCATGCATGT GTTCTCAAGC
GATGATGGCG ACCTCGACCT GAAATGCCCG ACAGAAGTCG GCATTACCGA CCGTCGCGAC
GCCGAGTTGG GCAAGCTGGG CTTCCTTCCG CTCTGCCACT ACAAGAACAC CGATTACGCC
GTGTTCTTCG GCGCGCAAAC CGCCCATAAG CCGAAGCTCT ACGACAAGCC CGAAGCGACA
GCCAATGCCG CCGTTTCCGC CCGCCTGCCC TATATGATGG CGACCTCACG GTTCGCCCAT
TATCTGAAGG TCATGGGCCG CGACAAGATC GGCTCCTTCA TGGAAGCAGA CGATTGCGAA
GTCTGGCTCA ATCGCTGGAT CTCCAATTAC GTCAATGCGA ATGACGATGC TGGAGAAGAT
TCGCGCGCAA AGTATCCGCT GCGCGATGCC AAGGTGACGG TACAGGAAAT CCCTGGCAAA
CCGGGCTCCT ACAATGCGGT CGCCTGGCTG CGTCCATGGT TGCAGATGGA AGAGCTGACA
ACTTCGCTGC GCATGGTTGC CCGTATTCCA TCGAAAAACT GA
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| Protein sequence | MSAESVLKPN EPTAATEEQG LLSKVVAATR QTEPDRARNL LSTLTDQALK GTVKYDRNLT
VTLNNAIAEL DKVISTQLAA IMQSPEFTKL EGSWRGLNYL VKNSETSVNL KIRVLNASKR
ELSKDLAKAV EFDQSRLFKS IYEDEFGTPG GEPMGAVVGD YEFDNSFEDV QLLQGVSSIA
AAAFAPFVSA ASPRMFGFDD FRELSRPRDL EKIFETVEYA KWRSFRESDD SRFVTLALPR
VLARMPYSPK TSQIDEFGFD ETLGEASGEL HHDSYCWMNA AYVMGTRLTE AFAKNGWCTA
IRGAENGGKV ENLPMHVFSS DDGDLDLKCP TEVGITDRRD AELGKLGFLP LCHYKNTDYA
VFFGAQTAHK PKLYDKPEAT ANAAVSARLP YMMATSRFAH YLKVMGRDKI GSFMEADDCE
VWLNRWISNY VNANDDAGED SRAKYPLRDA KVTVQEIPGK PGSYNAVAWL RPWLQMEELT
TSLRMVARIP SKN
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