Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_6024 |
Symbol | kamA |
ID | 7380851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 1031984 |
End bp | 1033033 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643649526 |
Product | L-lysine 2,3-aminomutase |
Protein accession | YP_002547757 |
Protein GI | 222106966 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1509] Lysine 2,3-aminomutase |
TIGRFAM ID | [TIGR00238] KamA family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACCGCGT CCGTCAAAAC AGTGAAAACT GTCAGGGAAC TGGTCGAGAC CGGACTTGTT GCTGCCGAAA CGGGTCCGGA ATTGGACGCG GTGGCTGCCC GCTACGCCAT TGCCATTACT CCGGCCATGC TGGCGCTGAT CGACCCAAAC GACCCCACAG ACCCGATTGC CGCGCAATTC GTGCCGCAGG CTGGCGAATT GGTGCATCAA CCCGTGGAGC GGGCCGATCC GATCGGTGAC CATGCCCATA GCCCGGTGGA GGGCATTGTG CATCGCTATC CCGACCGGGT TCTGTTGAAG GTGGTGCATA GCTGCCCGGT CTATTGCCGT TTCTGCTTTC GCCGTGAAAT GGTCGGGCCG GACGGTGATG GTCTGCTCTC TGGCCCGGCG CTGGACGCGG CCATAACCTA TATCCGTGAC CACAAGGATA TTTGGGAAGT GATCTTTACC GGCGGCGATC CGCTGGTTCT GTCGCCACGC CGGCTGCGGT CGATCTTGCA GCAATTGGGC ACCATCGATC ATGTCCGGAT CATCCGGTTT CACAGCCGTG TTCCTGTCGC CGATCCGGCC CGTATCGACA AGGATCTGAT CGACGCCTTG CAGGCAAGCG GCAAGACCAC CTATATCGCC ATTCACGCCA ACCATCCGCG CGAGCTGACG CCACAAGCCA GGGCGGCGAG CGCAAAGCTT CTGCAAGCCG GTTTTGCGCT TTTAAGTCAA ACGGTGCTGC TGAAGGGTGT CAATGACGAT GCTGGCGTGC TGGCAGACCT GATGCGCAGT TTTGTCGACA TGCGTATCCG GCCTTATTAC CTGCATCACC CGGATCTGGC GCCCGGCACC GGCCATTTTC GTCTCAGCAT AGCAGAAGGC CAAGCCATCG TCTCAGCCCT GCACGGGCAT CTGTCCGGTC TCTGTCAGCC AACTTACGTG CTGGATATTC CCGGCGGCCA CGGCAAGGCG CCGATCGATG CGAGCCAGAT CAGCAAGGAA GGCGATCATT ATCTGGTCAC GGACTTCCAT GGACATCACC ACATTTATCG TGATCGGTAG
|
Protein sequence | MTASVKTVKT VRELVETGLV AAETGPELDA VAARYAIAIT PAMLALIDPN DPTDPIAAQF VPQAGELVHQ PVERADPIGD HAHSPVEGIV HRYPDRVLLK VVHSCPVYCR FCFRREMVGP DGDGLLSGPA LDAAITYIRD HKDIWEVIFT GGDPLVLSPR RLRSILQQLG TIDHVRIIRF HSRVPVADPA RIDKDLIDAL QASGKTTYIA IHANHPRELT PQARAASAKL LQAGFALLSQ TVLLKGVNDD AGVLADLMRS FVDMRIRPYY LHHPDLAPGT GHFRLSIAEG QAIVSALHGH LSGLCQPTYV LDIPGGHGKA PIDASQISKE GDHYLVTDFH GHHHIYRDR
|
| |