| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5945 |
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| Symbol | |
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| ID | 7381032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 960435 |
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| End bp | 961388 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649460 |
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| Product | dioxygenase |
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| Protein accession | YP_002547691 |
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| Protein GI | 222106900 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0346] Lactoylglutathione lyase and related lyases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACACG GCATTCATCA CGTCACAGCT ATTGCTGGCC CAGCGCGCCG CAATCTCGAT
TTCTACACCC GGGTTCTCGG CCAGCGCTTC GTCAAGAAGA CTGTGAATTT CGACGATCCC
GGCACCTATC ACTTCTATTT CGGCGATGAG GCAGGCAATC CGGGCACGAT CATGACCTTC
TTCCCCTGGG AACACGCCGC ACCGGGCCGC CTCGGCATCG GTGAAACCCA GGAAACCGGT
TACCGGGTTC CCAAATCCTC CCTGGGGTTC TGGGCGCACC GTTTTATCGA ACAGGGCGTC
GTGCATGAAA AGCTCGAACA GCGCTTTGGC CAGACAGTCC TGCCCTTCAA GGATCCGGAT
GGGATGCGAC TTGCCCTGGT CGGCATTGAA GACATCGAAC ACGAAGCCGC CTGGGCTGCA
CCGGGCATTC CTGCGGAGCA CGCGCTGCGG GGATTTCACG GGGTGACGCT GCTGCTGGAC
AAGATTGACG CAACGGCTGC TGTCCTGACC GATGTGTTCG GCTTTGAACA GCAGGGCAAG
GAAGGCTATG TCACCCGGTA TCATGTGCCT GGCACGGAGA TCGGTGGGGT TGTGGACCTG
CGCGCCGCCG GTGAATTTCT GCCCGCCCGG CCAGGTGCTG GCTCGGTGCA CCACGTTGCC
TTCAGAGCGA AGGACGATGC AGAACAGGCG GAAATGGCCG AAAAACTGCG TAAGAATCAC
CGCTTGCAGA CAACGGAACA GAAAGACCGG GACTATTTCC GCTCGATCTA TTTCCGTTCT
CCGGGTGGCG TGTTGTTCGA AATCGCCACG CTCGACCCCG GCTTTGCCGT CGATGAACCG
GCAGAAAGCC TGGGTCAGGC CTTGAAGCTG CCGAAGGGCC TTGAAGGCTT CCGGGGCCGG
ATTGAGGGCA TGTTGCCGGA TATCAGCCCC CTTGGCGAGA CCAAGCAGGC TTAG
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| Protein sequence | MAHGIHHVTA IAGPARRNLD FYTRVLGQRF VKKTVNFDDP GTYHFYFGDE AGNPGTIMTF
FPWEHAAPGR LGIGETQETG YRVPKSSLGF WAHRFIEQGV VHEKLEQRFG QTVLPFKDPD
GMRLALVGIE DIEHEAAWAA PGIPAEHALR GFHGVTLLLD KIDATAAVLT DVFGFEQQGK
EGYVTRYHVP GTEIGGVVDL RAAGEFLPAR PGAGSVHHVA FRAKDDAEQA EMAEKLRKNH
RLQTTEQKDR DYFRSIYFRS PGGVLFEIAT LDPGFAVDEP AESLGQALKL PKGLEGFRGR
IEGMLPDISP LGETKQA
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