| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5914 |
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| Symbol | dat |
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| ID | 7381005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 921780 |
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| End bp | 922646 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649427 |
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| Product | D-amino acid aminotransferase |
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| Protein accession | YP_002547664 |
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| Protein GI | 222106873 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01121] D-amino acid aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCAATC CCGCCCTTCG CACCGTTTAT CTCAATGGCG CCTTCCTGGC CGAAAACGAA
GCGCATATCT CGATTTTTGA CCGTGGCTTT CTGTTTGGTG ACGGCATCTA TGAAGTGACC
GCCGTGCTGG ACGGCAAGCT GGTTGACAGC GCCCTGCACA TGACCCGGCT GGAGCGCAGC
GTCGGCGAAA TCGGCGGGCA TCTGCCGGTA TCGACGGATG AAATCGTTGA GATTGAGCGG
CGGCTTATTG CCGAGAACGG CTTGAAGGAA GGGATGATCT ATCTGCAATA TACAAGAGGT
GCAGAAGATC GCAATTTCCT CTATTCCGAG GATCTCGCTC CGACCTTGCT GCTGTTTACC
CAGTCAAAAT CGCTCGACGT TGCCAGCGTT ATGGAAAAAG GCCTGAGGGT CAAAACCGTG
ACGGACCAGC GCTGGGCGCG ACGCGATATC AAAAGCGTCT GCCTTCTGCC GCAGGTTCTG
GCCAAGCGCG CCGCCAAGGC CGAAGCATGT GACGAAGCCT GGATGGTGGA AGACGGTTTC
GTGACCGAAG GCGCGTCCTC GACGGCCTAT ATCGTCACCG CCGATGACAA GATCATCACC
CGCGCCAATA GCAACGCAAC ATTGCCCGGC TGCACCCGGC TGGCGCTGCT GCAATTGGCA
AAGGAACATG GGCTTGTTAT CGAAGAGCGT CCCTTCAGCG TTGAGGAAGC GCTGGGGGCC
CGCGAAGCGG CATTGACCAG CGCCTCGAAT TTCATCGTGC CGATCACCAG CATCGATGGC
AAACAGGTTG GCGATGGCAA GCCCGGCCCA GTGGTAACGC GGCTGCGGGC GCTCTACATG
GAAAACGCCC GCAAGACGGC GATTTAA
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| Protein sequence | MSNPALRTVY LNGAFLAENE AHISIFDRGF LFGDGIYEVT AVLDGKLVDS ALHMTRLERS
VGEIGGHLPV STDEIVEIER RLIAENGLKE GMIYLQYTRG AEDRNFLYSE DLAPTLLLFT
QSKSLDVASV MEKGLRVKTV TDQRWARRDI KSVCLLPQVL AKRAAKAEAC DEAWMVEDGF
VTEGASSTAY IVTADDKIIT RANSNATLPG CTRLALLQLA KEHGLVIEER PFSVEEALGA
REAALTSASN FIVPITSIDG KQVGDGKPGP VVTRLRALYM ENARKTAI
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