| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5861 |
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| Symbol | |
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| ID | 7380636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 875679 |
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| End bp | 876602 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649386 |
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| Product | 2-hydroxyacid dehydrogenase |
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| Protein accession | YP_002547623 |
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| Protein GI | 222106832 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTTTC TCTTCAACTC AGATCCGGTG CGTGGCGCGG TCTTCGCGCA GGCCTTCGCG
CGCGACATGC CCGATGTGGA TTTTTATGTC GCGCCATCGC CGGTTGATCC CAAACATGTC
CGCTACTTGA TGACCTGGGC AATGCCGCAG GAGATCGAGC GTTATGCCAA TCTCGAAGTG
CTGTTTTGCA TCGGCGCCGG TGTTGATCAG TTCGATCCCG GCCGGCTGCC CGATACCGTC
AAGCTGGTGC GGATGGTGGA GGATGGAATC GTTCGGATGA TGCAGGAATA TATCACCCTT
GCCGTGCTTT CCGTTCATCG CAAGCTGCCA GCCTATCTTC GCCAGCAGCA GCAAGGTGAA
TGGCAGTCTT TGCCGATATC TCAGGCGCCT GCTCAACGGG TGACGGTGCT GGGCCTTGGC
CTGCTGGGGC AGGCGGCGCT GGAGCGGTTG AAACCGTTCG GCTTTCAGCT GTCAGGCTGG
AGCCGTTCGC CGCGTGAAAT CGATGATGTC ACCTGTCATG CCGGAATAGA AGTGCTGCCG
GATCTGCTGG AGCAGACCGA TATTCTCGTC TGTCTTTTGC CCCTGACAGC AGAGACCCGG
CATTTCCTCA ATGCCGAACT GTTTGCCCGC CTGCCGCGCG GAGCATCGCT CGTTCACGCC
GGGCGTGGTG CGCAACTGGA TCAGGCGGCG TTGCTGGCTG CGCTCGAGAG CGGCCAGCTC
GCCAGCGCTT TTCTCGACGT CACCGATCCC GAACCGCTGC CATCGGACCA TCCTTTATGG
CGGCAGGCGA ATGTGATCAT CACGCCCCAT ATTGCCAGCG TCACCCAGCC GGAGACTGCC
GCCATAGCGG TGATCGACAA TATCCGTCGT CATCGCGCTG GTGAAGAGAT GATTGGCCTT
GTTGATCGTG AGCGCGGATA TTAA
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| Protein sequence | MAFLFNSDPV RGAVFAQAFA RDMPDVDFYV APSPVDPKHV RYLMTWAMPQ EIERYANLEV
LFCIGAGVDQ FDPGRLPDTV KLVRMVEDGI VRMMQEYITL AVLSVHRKLP AYLRQQQQGE
WQSLPISQAP AQRVTVLGLG LLGQAALERL KPFGFQLSGW SRSPREIDDV TCHAGIEVLP
DLLEQTDILV CLLPLTAETR HFLNAELFAR LPRGASLVHA GRGAQLDQAA LLAALESGQL
ASAFLDVTDP EPLPSDHPLW RQANVIITPH IASVTQPETA AIAVIDNIRR HRAGEEMIGL
VDRERGY
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