| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5771 |
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| Symbol | oxyR |
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| ID | 7381648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 800441 |
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| End bp | 801364 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649320 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_002547557 |
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| Protein GI | 222106766 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGACCA TACGTCAAAT GCGCTATTTC GATGCCCTTG CCACCACACT CCATTTCGGC
CGGGCTGCCG ATCTTGTCCA TGTCAGCCAA CCGGCACTGT CGGCGCAGAT CATGGAAATG
GAAAAACATC TGGGTGTGAT GCTGATCGAG CGCACGCGCG CCAGCACGAT CCTGACTACC
AAGGGACTGG AAATCCTGAC CCATGTGCGC GAAGTGCTGG CGGGAATAGA TCGGCTGGAA
CAGGCGGCGC GAAACAATGG CGGCATGTTG GAAGGCCTGG TGCGGATTGG CATCATTCCG
ACCGTCGCCC CCTATATGGT GCCGCGCATG GTGCCTTATC TGCGGCAAAA TCATCCTCTG
ATCGAGATCG AGCTTAAAGA AGCGATCACA GATCGACTGC TGTCCGACTT GAATGACGGC
AAACTGGATG CGGTCGTCGC GGCGCTACCG GTGGATGCGG ACGCTCTGGT CTGCCGCAGC
CTGCTCGTCG ATCGGTTTTT CATGGCCGTG GCCCGCAATG ACGACGCCGT GCTTCTATCG
CCTCTGGTGG AGGCGGACGT AGACACCGAC CGGTTGCTGC TGCTGGAGGA AGGCCATTGC
CTGCGCGACC AGGCGCTGGC CGTCTGCAAA ACCGCCAGCC GGCGCAGCAT GGTCAATTTC
GGCGCAACCT CGATGGCGAC ACTGCTCCAG ATGGTGTCCC ATGATATGGG CATGACGCTG
ATCCCCGAAA TGGCGATCGA GACCGAAACC AGCCGCAACA AGATCCGCAT CATTCCCTTT
ACCGATCCGC CGCCCTACCG CGAAATCGGC CTGATCTGGC GGCGATCCAG CGCCCGCCAA
GCCGATATGG AAGCGCTGGC CGATGGTCTT GCCGCCAGCG CACGGGAAAA ATCGACACCC
TCGGAACCGC GGCAGGATCT CTAA
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| Protein sequence | MLTIRQMRYF DALATTLHFG RAADLVHVSQ PALSAQIMEM EKHLGVMLIE RTRASTILTT
KGLEILTHVR EVLAGIDRLE QAARNNGGML EGLVRIGIIP TVAPYMVPRM VPYLRQNHPL
IEIELKEAIT DRLLSDLNDG KLDAVVAALP VDADALVCRS LLVDRFFMAV ARNDDAVLLS
PLVEADVDTD RLLLLEEGHC LRDQALAVCK TASRRSMVNF GATSMATLLQ MVSHDMGMTL
IPEMAIETET SRNKIRIIPF TDPPPYREIG LIWRRSSARQ ADMEALADGL AASAREKSTP
SEPRQDL
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