Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5766 |
Symbol | |
ID | 7381644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 795318 |
End bp | 796454 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643649316 |
Product | Patatin-like phospholipase domain-containing protein |
Protein accession | YP_002547553 |
Protein GI | 222106762 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGTCGT CCGAGACCAA TGCCGCCACT GATCGTATTT TTGTCTTTCA GGGTGGGGGG GCTTTGGGTG CTTATCAGGC CGGTGCTTAT GAGGCTCTTC ACGCCCATGA TGTCGATCCG GATTGGCTGG CCGGTATTTC CATCGGATCG ATCAACTCGG CGCTGATTGC TGGCAGCCCC AGGGAAAAAC GGGTGGAAAA CCTGCGCGCC TTCTGGGACA TGGTGTCTTC ACAGCTGAAT TTCAACCTTG GCGATCAAGA CACCGCGTCG CGGCGCACCA CCAACGATCT CTCGGCGCTG ACCGGCATGA TGTTTGGCAT TCCCGGCTTC TTTTCACCGC GTCTGCCCAC CCCGCAGCAA GTGTTGCTCA ATCCTGATTA CCGCGTCAGC GTTTATGACA CCGAACCGCT GATCAAGACG CTGAACAATC TGATCGATTT CAAATTGCTG AATGACGGCA CGACACGTCT CAGCCTCGGC GCTGTGGACG TTCTCTCCGG CAATTTCGCC TATTTCGACA ATCGTCACAC CAGGCTCGAT GCCCGCCATA TCGCTGCTTC CGGCGCGCTG CCGCCCGGTT TCCCACCGGT TGAAATTGAT GGCCGGTTTT ATTGGGATGG TGGATTGGTC TCGAACACAC CCTTGCAGCA TGTGCTGGAA ACCAATGAAA GCCAGAGAGA TCTGGACATT TTCCAGGTCG ATCTGTTCAG CGCGCGCGGC GACATGCCAA AGGACCAGTT CGAGGTGGAA AGCCGCACCA AGGAGATTCG GTTTTCCAGC CGAACCCGTA TGAATACCGA TGAATTCGCC CGCAAACAGG TGATCCGCCG CACCGCCAAA CGCCTGCTGG ACAAGCTGCC ACCGGAATTT CGCGATGACG AGGATGCCAA GCTGCTGCGC TCCATTGGCC AGGAATATGA CGTCACCATC GTCCACCTCA TTCACCGGCG CGCCGCCCAC GCCACCCATT CGATGGACTA TGAATTTTCG CGCGCCTCCA TCAACGAACA TTGGCAGGCT GGATACGACG ACGCCACCTA CACGCTGAAA CATCCGAAAT GGCGCAACCG CGGCCGCCCA AGGGATGGCA TTCAGATCTT CGATTTGAGC CGCGAACGTC GTCGTATCGG GTCGTGA
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Protein sequence | MLSSETNAAT DRIFVFQGGG ALGAYQAGAY EALHAHDVDP DWLAGISIGS INSALIAGSP REKRVENLRA FWDMVSSQLN FNLGDQDTAS RRTTNDLSAL TGMMFGIPGF FSPRLPTPQQ VLLNPDYRVS VYDTEPLIKT LNNLIDFKLL NDGTTRLSLG AVDVLSGNFA YFDNRHTRLD ARHIAASGAL PPGFPPVEID GRFYWDGGLV SNTPLQHVLE TNESQRDLDI FQVDLFSARG DMPKDQFEVE SRTKEIRFSS RTRMNTDEFA RKQVIRRTAK RLLDKLPPEF RDDEDAKLLR SIGQEYDVTI VHLIHRRAAH ATHSMDYEFS RASINEHWQA GYDDATYTLK HPKWRNRGRP RDGIQIFDLS RERRRIGS
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