| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5699 |
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| Symbol | |
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| ID | 7381587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 723488 |
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| End bp | 724471 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649259 |
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| Product | ABC transporter membrane spanning protein (oligopeptide) |
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| Protein accession | YP_002547496 |
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| Protein GI | 222106705 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0252968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTACGGT TCATCACATT GCGCGTGCTG GGCATGATCC CAGCGATGTT TGCCATTTCG
CTTCTGACCT TCGTGGTGAT CCAGTTGCCG CCCGGCGATT TCGTCTCGAC GCTGGCCGCC
CAGGCGGCTG AAACCGGCGA TACCATGTCT CCTGCCCAGT TGGAGACCCT GCGCCAGCGC
TATGGCATTG GCGAGCCGGT CGTGCTGCAA TATGTCCACT GGATTGGCGG CGTGATGCAT
GGCGATTTCG GCTATTCCTT CGAGTGGAAC CAGCCTGTCA GCCAATTGGT GATGCAGCGG
ATGGGGATGA CAGCGCTGGT CGCCTTCATC ACCCTGATGT TCGTCTGGCT GACGGCCCTG
CCGATCGGCA TCTATTCCGC CGTGCGCAAA TATTCTCCGG GCGATTACCT TTTCACCCTG
CTGGGCTTTA TCGGCATGGC AATCCCGAAT TTCCTGCTGG CCATCCTGCT GATGTATGTG
GCGACCATTC ACTTCGGCCA GAGCGTCGGC GGGTTATTCT CGCCGGAATT CGCCAATGCC
CCCTGGTCAC TGGCCCGAAT CGGGGATTTT CTCAAGCATG TCTGGATCCC CGTGATCATC
CTGGGGGCCA GCGGCACGGC GGCGCTGATC CGCGTCATGC GCGCCAATCT GCTTGACGAA
TTGCGCAAGC CTTATGTGGA AGCGGCCCTT GCCAAAGGGC TGCCAGAACG GCGGGCGATC
CTGCGGTATC CGGTGCGCGT TGCCATCAAC CCGTTCATTT CCACCGTCGG CTGGGTATTG
CCGACCCTGA TTTCCGGCGA GTTGATCGTG TCCACCGTGA TGAACCTGCC CACCGCCGGA
CCTCTCCTTT TGCAGGCGCT GAAATCCCAG GACATGTACC TGGCCGGTGC CTTCCTGCTG
ATGACCGGTG GCCTGGTCCT GGTCGGTACG CTGCTGTCCG ACATCCTGCT TGCCATCGTC
GATCCAAGGA TTCGTCTGAC ATGA
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| Protein sequence | MLRFITLRVL GMIPAMFAIS LLTFVVIQLP PGDFVSTLAA QAAETGDTMS PAQLETLRQR
YGIGEPVVLQ YVHWIGGVMH GDFGYSFEWN QPVSQLVMQR MGMTALVAFI TLMFVWLTAL
PIGIYSAVRK YSPGDYLFTL LGFIGMAIPN FLLAILLMYV ATIHFGQSVG GLFSPEFANA
PWSLARIGDF LKHVWIPVII LGASGTAALI RVMRANLLDE LRKPYVEAAL AKGLPERRAI
LRYPVRVAIN PFISTVGWVL PTLISGELIV STVMNLPTAG PLLLQALKSQ DMYLAGAFLL
MTGGLVLVGT LLSDILLAIV DPRIRLT
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