| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5697 |
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| Symbol | |
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| ID | 7381585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 720612 |
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| End bp | 722318 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643649257 |
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| Product | ABC transporter nucleotide binding/ATPase protein (oligopeptide) |
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| Protein accession | YP_002547494 |
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| Protein GI | 222106703 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.110547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCGA ACGTAAAGCC CCTCTTGCAG GTCAAGAACC TCAGTGTCGA ATTTCCCGTG
CATCGCCAGG TGATCCAGGC TGTCCGCAAT GTCTCCTTCG ACGTCTATGA AGGCGAAACC
CTTTGCGTGC TGGGCGAAAG CGGCTCGGGC AAAAGCGTTA CCGCCCGCGC CATCTTGAAA
CTGCTGGCCG ATCCGGGTCG CCTGACATCG GGTGAGATCC TTCTCGCTGG CGAAAACGGC
AAAGCCGACC GCGACATCGC CAAGCTCAAA TCCTCCAGCC AGGACATGCA ATCGATCCGG
GGCGGTCAGA TCGCCATGAT CTTTCAGGAG CCGATGACCT CGCTATCGCC CGTACATCGG
ATCGGCGAGC AGATCATCGA AGCGATCCTG CTGCATGAGA AAATGGACAA GGGTGAGGCG
CGCGTCCGCG CCATCGACCT GTTGCGTCAG GTGCGCATTC CCGATCCGGA AACCGCCATC
GACCGCTATC CCTTCGAATA TTCAGGCGGC ATGCGCCAGC GCGCCATGAT CGCCATGGCG
CTGTCGTGCA ATCCGCGCCT GTTGATTGCC GATGAGCCGA CCACGGCGCT CGACGTCACC
ACCCAGGCCG AGATTCTCGA CCTGATCGTC TCGCTTCAGC GTGAGCGCGG CATGGCCGTG
CTGTTCATCA CCCACGATAT CGGCGTGGTG GCTGAGATCG CCGACCGGGT GATGGTGATG
TATCGCGGGG AAAAGGTCGA GGAAGGGCTG GCGGAACAGG TTCTGCGCCG TCCCGCCGCT
GCCTATACCG CAGCGCTTCT GGGCGCCGTG CTGAAGCTGG AAACACCTTT GCCGCGCCGC
ACGCTTCCCG CCGCCGCCAA GCCGCTGATG GAGGTTTCCG ACCTGCACTT GCAGTTCGGC
TCGCGCCGCC GCTGGGGAGT GAAACAGACA TTCGGCGTTA AGGCTATCGA CGGTGTTAGT
CTAACGCTAG CCCCCGGCGA AACCCTTGGG ATCGTCGGAG AAAGCGGATC GGGCAAGACC
ACGCTTGGCC GCACCATGCT GCAAATCTAC AAGCCCACGG CTGGCCATGT GCATTATGCC
GATGCCAACG GGCAAGACGT TGACATCGCC AAAGCATCGC GCAACACCAT GCGTCATCTC
TATACGGAAA TGCGCATGGT GTTTCAGGAC CCACATTCTT CGCTCAATCC ACGCATGACG
GTGTTTGAAA CCATCGCCGA GCCGATGCGG ATGATGGGCC TGACCACCAC CCAGATGCGG
GAACGGGTGG AATATCTGCT CGACCGCGTT GGCCTGCCAA CCAATGCCAT CAACCGCTAT
CCGCATGCCT TTTCCGGTGG TCAGCGTCAG CGTATTTCCA TCGCCCGCGC CATCGCGCCC
AATCCACGGC TGATCATCGC CGATGAGCCG ACCTCGGCGC TGGACGTGTC GCTGCGCCAT
CAGGTTCTCG ATCTACTGGC CGAATTGCGG GCCGAGCTTG GCATCAGCTT CATCTTCATC
AGCCATGACA TTACCGTGGT GCGCTATTTC TGCGACCGGG TGGCGGTGAT GCAAAAGGGC
AAGATCGTCG AAATGGGCGA TGCCGACGAC ATCTGCCTGC GGCCCCAGCA TCCCTATACC
CAAAAGCTGA TCGCCTCAGT GCCGCAGCCC GATATGTCGA GACGGCGCAA ACCGCTGATC
ATGCCGCAGG CGATGGGGGT GCAATGA
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| Protein sequence | MTSNVKPLLQ VKNLSVEFPV HRQVIQAVRN VSFDVYEGET LCVLGESGSG KSVTARAILK
LLADPGRLTS GEILLAGENG KADRDIAKLK SSSQDMQSIR GGQIAMIFQE PMTSLSPVHR
IGEQIIEAIL LHEKMDKGEA RVRAIDLLRQ VRIPDPETAI DRYPFEYSGG MRQRAMIAMA
LSCNPRLLIA DEPTTALDVT TQAEILDLIV SLQRERGMAV LFITHDIGVV AEIADRVMVM
YRGEKVEEGL AEQVLRRPAA AYTAALLGAV LKLETPLPRR TLPAAAKPLM EVSDLHLQFG
SRRRWGVKQT FGVKAIDGVS LTLAPGETLG IVGESGSGKT TLGRTMLQIY KPTAGHVHYA
DANGQDVDIA KASRNTMRHL YTEMRMVFQD PHSSLNPRMT VFETIAEPMR MMGLTTTQMR
ERVEYLLDRV GLPTNAINRY PHAFSGGQRQ RISIARAIAP NPRLIIADEP TSALDVSLRH
QVLDLLAELR AELGISFIFI SHDITVVRYF CDRVAVMQKG KIVEMGDADD ICLRPQHPYT
QKLIASVPQP DMSRRRKPLI MPQAMGVQ
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