Gene Avi_5593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_5593 
SymbolexsG 
ID7381073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp604066 
End bp605124 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content60% 
IMG OID643649167 
Producttwo component sensor kinase 
Protein accessionYP_002547404 
Protein GI222106613 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCGC TATCGCCCCA GGAGGAACTG GTCCAGGATG AGCTGGATTG GGTGCTGGTC 
TGCGCACCTT TTCGCAAGGA TGCCGATTAT GTCGGCGCGC TTTTGCGCGA ACATCTGATC
GAGGTGCGGG CCGTAACGGA GGCCAAGGGC TTCGCCCAGT TGCTGGATGC TTCACCTGGG
ATTGTGATTG TGTCACATGA AGCTCTGACG CCCCAGATTG TTGCCCTGAC CGCCGCGCAT
CTCACCCGGC AGCCGAACTG GTCTGAAGTG CCGATCATTG TTCTTCTGGA GCGGGGCGCG
CCCCTGACGC GGATCCGCAG CCAATTGCTT TCCGCCTGGC CGGGAGCGCG GCTTTTGTTC
TACACACGTC CCGTGGCGCC GCTGGAACTG GTCAGCGGTA TCCAGTCCAA CCTGCTGGTG
CGCTTGCGCC AGCGGCAGGT GCGCGATTCC ATCGAGCGGG AGCGGGAATT GCGGGCAGAG
CTTAATCACC GGGTCAAGAA TATCCTGGCA ACGGTGACAT CGATCTTTCG CATGACACGG
CGCGGTGCCG AAAGCCTTGA CGATCTTGCA ACGGATTTCA ATGGGCGACT GCTGGCGCTT
TCCAATGTCC ATACGGCAGT TTTTGAGGCC GGGGGCGAGG ATGTCTCGCT ATCGGCGGTG
GTTGATCTGA TCGTTTCGCC CTATGGCACC GAGCGGATTG CCGTTGACGG TAGTGATCTG
CTTGTCAGTC GTGAAGCCGG AACGACGCTG GCGCTTTGCT TGCATGAATT GATCACCAAT
GCGATCAAAT ATGGCGCCCT GTCGGTCCCG GAAGGGCGTG TTTCCCTTCG TTGGGAGGTT
GATGGTGGGG AGAAACCGAC CTTCCAGTTC CATTGGCAGG AGAGCAACGG GCCGCCTGTC
CGTACACCGG CTCGGCAAGG CTATGGGACA CGCTATGTTA CCTCCGCCCT TGCATCACTG
TTTGCAGCGA CGCCCGATAT CCAGTTTGCC GAAGACGGTT TGGTTTGCAG CGCTACGGGG
CCCTTTGCGC GGATCTCGCC TGCGACAGTC GCTCGCTAA
 
Protein sequence
MTSLSPQEEL VQDELDWVLV CAPFRKDADY VGALLREHLI EVRAVTEAKG FAQLLDASPG 
IVIVSHEALT PQIVALTAAH LTRQPNWSEV PIIVLLERGA PLTRIRSQLL SAWPGARLLF
YTRPVAPLEL VSGIQSNLLV RLRQRQVRDS IERERELRAE LNHRVKNILA TVTSIFRMTR
RGAESLDDLA TDFNGRLLAL SNVHTAVFEA GGEDVSLSAV VDLIVSPYGT ERIAVDGSDL
LVSREAGTTL ALCLHELITN AIKYGALSVP EGRVSLRWEV DGGEKPTFQF HWQESNGPPV
RTPARQGYGT RYVTSALASL FAATPDIQFA EDGLVCSATG PFARISPATV AR