| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5585 |
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| Symbol | togA |
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| ID | 7381067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 596372 |
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| End bp | 597466 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643649161 |
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| Product | ABC transporter galacturonide binding/ATPase protein |
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| Protein accession | YP_002547398 |
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| Protein GI | 222106607 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00523647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACAA GCGTCACCCT GCAAAAGGTC TTCAAACGGT ATGGCGCGCT TGAAGTGATC
CATGGCGTGG ATCTCGAGAT CACGCCAGGA GAATTCGTGG TGTTTGTTGG CCCGTCCGGC
TGCGGAAAAT CCACGCTGCT GCGGATGATC GCTGGGCTTG AGCCGATTTC CGGTGGCACT
CTGCTGCTGG ATGGGCAAAG GATGAACGAA GTGCCGGCGG CCAAGCGCGG CATTGCCATG
GTTTTTCAGT CCTATGCGCT TTATCCTCAT ATGACTGTTT ATAAAAACCT GGCCTTCGGT
CTGGAAACGG CTGGCATGAA AAAGAAGGAT ATCGAGCCGC GTGTCGAGCG GGCCGCCGAT
ATCTTGCAGA TCCAGCCGCT GCTGGGGCGC AAGCCCAAGG CTTTGTCCGG TGGTCAGCGT
CAGCGCGTCG CCATCGGGCG GGCCATTGTG CGTGAGCCGA ATATCTTCCT GTTCGACGAG
CCCTTATCTA ACCTCGATGC CGAATTGCGG GTGCAGATGC GTGTCGAGAT CGCCAAGCTC
CATCAGAGCC TCGGCAATAC CATGATCTAT GTGACCCACG ACCAGGTCGA AGCCATGACC
ATGGCTGACA CAATCGTGGT GCTGAAAGGC GGCTATATCG AACAGGTCGG CGCGCCACTT
GATCTCTATA ACAATCCGAA AAACAAATTC GTTGCGGGCT TCATCGGTTC GCCGCGCATG
AATTTCATCG ATACCCGGCT GGTGGAGGCT GGAGACAGAA CCGCTGTTGA GCTGAACGGC
AAGCCGGTCG ATCTGGCGCG GACAAGCCCC GGCGCACAGG TGGGGCAAAA AGTCAGCGTC
GGTGTCCGGC CCGAACATCT CAGCCTGCGT CCAGCCGAAA TTACCCTTGG CGAGGCGCAT
GTCGATCTGG TCGAGCATCT GGGCGGGCAG ACCATTCTCT ATTTGTCCAT GCAGGACGGT
CAGTCGATTG CCATGGTGAT GGAAGACCAG CAGGCAATCC GCAAGGGCGA GAAGGTGACG
ATCCATATCG ACTCGAAACG CTGCTATCTG TTTGACGATG CCGGAAACCG GGTAAACGGT
GGTGTGAACC GATAG
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| Protein sequence | MATSVTLQKV FKRYGALEVI HGVDLEITPG EFVVFVGPSG CGKSTLLRMI AGLEPISGGT
LLLDGQRMNE VPAAKRGIAM VFQSYALYPH MTVYKNLAFG LETAGMKKKD IEPRVERAAD
ILQIQPLLGR KPKALSGGQR QRVAIGRAIV REPNIFLFDE PLSNLDAELR VQMRVEIAKL
HQSLGNTMIY VTHDQVEAMT MADTIVVLKG GYIEQVGAPL DLYNNPKNKF VAGFIGSPRM
NFIDTRLVEA GDRTAVELNG KPVDLARTSP GAQVGQKVSV GVRPEHLSLR PAEITLGEAH
VDLVEHLGGQ TILYLSMQDG QSIAMVMEDQ QAIRKGEKVT IHIDSKRCYL FDDAGNRVNG
GVNR
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