Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5584 |
Symbol | |
ID | 7381066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 595302 |
End bp | 596372 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643649160 |
Product | oxidoreductase |
Protein accession | YP_002547397 |
Protein GI | 222106606 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0916209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTAAGA CCTTCAACGT TGCCGTCATT GGCCTTGGCA TCGGCGCGCG TCATATCCGC GAGGGCTATA TGCCGAATAC GGATCTGTTC CGGGTTGCCA CCATTTGCGA TCTTGATCCC GCTCGTCTGG CCCAGTTTGG CGAGGAGTTT TCTATCGCGG GACGGACCGA TGATTTCGAC GCCGTGCTCA ACGATCCTTC CATCGACATT GTCGATATCT GCACGCCGCC CTCCACCCAT TACGACCTGA TCTTCAAGGC GTTGGACGCG GGCAAGCATG TGATCTGCGA AAAGCCGCTT GTCGGTTCGC TTGCGGAAAT CGACCGGTTG ATGATCCATG AGAAGACCGC CAAAGGCCGG TTGATGCCGA TTTTCCAGTA CCGTTACGGC GACGGCGTCC ACAAGGCGCG CCGGATCATC GAGGCGGGTC TGGCGGGTAA AGCCTACATC GCTACGTCAG AAACCCATTG GACGCGGTTG TCGGACTATT ACGCCGTGCC GTGGCGGGGC AAGTGGGCGA CAGAACTTGG TGGCGTGCTG ATGACCCATG CCATCCATAT CAACGATATG TTGAGCTATC TGCTGGGGCC GGTCGCCTCG CTCTATGCCC GGGTCGCTAC TCGCGTCAAT CCGATTGAAG TGGAGGACTG CGTCAGCCTC AGCCTGGAAA TGACAAGCGG TGCCTTGGCA ACCGTGTCGG CGACGTTGGG TTCGGCGGAG GAAACCTCGC GGCTGAAGCT GTGCTTTGAA CATGTGACCT TCGAAAGCAG CCATGCGCCT TACCATCCCG GCGGCGATCC CTGGCGGATC ATTCCGGCCA ATCCTGAGAT CGGGCAGAAG ATCGACGCCT TGCTTGAGGG TTGGGTGCCG ATGGCCCAGC TGTTTTCCGG CCAGATGCAG GCTTTCCATG CCTGCCTGGT CAATGACACG CCGACGCCGG TCACGACGGA AGATGCCCGC CGCTCGCTGG AATTTCTCAC CGCTTGCTAT TGGAGCGCCA CTCATAAGCA GGAGGTGCAT TTCCCAGTTG GCAGCGACAA CGCCTATTAC GATAGCTGGA GGCATAACTG A
|
Protein sequence | MSKTFNVAVI GLGIGARHIR EGYMPNTDLF RVATICDLDP ARLAQFGEEF SIAGRTDDFD AVLNDPSIDI VDICTPPSTH YDLIFKALDA GKHVICEKPL VGSLAEIDRL MIHEKTAKGR LMPIFQYRYG DGVHKARRII EAGLAGKAYI ATSETHWTRL SDYYAVPWRG KWATELGGVL MTHAIHINDM LSYLLGPVAS LYARVATRVN PIEVEDCVSL SLEMTSGALA TVSATLGSAE ETSRLKLCFE HVTFESSHAP YHPGGDPWRI IPANPEIGQK IDALLEGWVP MAQLFSGQMQ AFHACLVNDT PTPVTTEDAR RSLEFLTACY WSATHKQEVH FPVGSDNAYY DSWRHN
|
| |