Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5493 |
Symbol | |
ID | 7381413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 490387 |
End bp | 491364 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643649085 |
Product | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
Protein accession | YP_002547322 |
Protein GI | 222106531 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTTG CAACTTATCA CGATGGAAGC CGCGACGGCC AACTCTGGAT CGTTTCGCGC GATCTGAAAC GGGCCGTTCC AGCAACCGGC ATCGCTGTGT CCCTGCTTGC TGCGCTGGAG GATTGGGATG CCGCCGCTCC CCGCCTTCTC GAACTGTATG AACGGGTCAA TGCGGGAGAT GAGCCCTTTG CCACCAGCTT CCAGCCGGAA CGGTGTCTGG CACCCTTGCC GCGTGCGCCG CAATGGCTGG ATGCGTCGGC TTTCCTCAAC CATGGTCGGT TGATGGATAA GGCCTTCGAC AATCCGGTTA ACCCGGACTT CGAGACAGTG CCCTTGATCT ATCAAGGGGC GAGCGACGAT TTCCGCGGGC CGCTGGCAGG CGTGGAGTTT CTCGACGACG CGCTGCTGAT CGACATGGAA GGCGAGTTCG GCGTTATTCT TGCCGATGTG CCGATGGGCG TGACACCGGA AAATGCCACC GATCACGTCC GTCTGCTGGT GCAGATCAAC GATTGGTCGC TGCGCGCTCT TGGGCCGCGC GAAATGCGGG CGGGTTTCGG GTTTCTCCAG GCCAAACCAT CGACGGCCTT TGCACCGGTC GCCATCACGC CGGACGAGAT CGGGCCGCAT TGGTCTAACG GTCGGACGGG TCTGGCTTTG CATGTGGAGA TCAACGGGCG GCGGGTCGGG GATGCGCATG GAAGCGAGAT GCATTTCTCC TTCGGTGAAT TGATCGCTCA TTGCGCCCGT AGTCGGCGTT TATCGGCGGG GACCATTCTG GGTTCCGGCA CAGTGTCCAA TGCAGATCGG GCCGCCGGTT CGTCTTGCAT TTCTGAAATC CGGGTGATCG AGCTTCTGGA TGAAGGCAAG GCGCGCACGC CCTTTCTGAC CTGGGGTGAT CAGGTGCGGA TGGAGGCACG GCTGCCGGAT GGGAGCACGC CTTTCGGGGT GATTGATCAG GCGGTGGTGA AGGCCTGA
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Protein sequence | MKFATYHDGS RDGQLWIVSR DLKRAVPATG IAVSLLAALE DWDAAAPRLL ELYERVNAGD EPFATSFQPE RCLAPLPRAP QWLDASAFLN HGRLMDKAFD NPVNPDFETV PLIYQGASDD FRGPLAGVEF LDDALLIDME GEFGVILADV PMGVTPENAT DHVRLLVQIN DWSLRALGPR EMRAGFGFLQ AKPSTAFAPV AITPDEIGPH WSNGRTGLAL HVEINGRRVG DAHGSEMHFS FGELIAHCAR SRRLSAGTIL GSGTVSNADR AAGSSCISEI RVIELLDEGK ARTPFLTWGD QVRMEARLPD GSTPFGVIDQ AVVKA
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