Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5482 |
Symbol | |
ID | 7381567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 477468 |
End bp | 478265 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643649074 |
Product | lipase esterase |
Protein accession | YP_002547311 |
Protein GI | 222106520 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0657] Esterase/lipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000559952 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGTAC AAGTGAAAGA TATGGTGCTG GACAAGCTGG CCGTCGGGCC GGTGTCGGCG CGTGTCTATC AGGGTGCCGA ATATGGCAAG GGGCCACCGG TCGTGTTGTT CTTTCACGCA GGTGCCTTCA TGGCGTCCGG CGTGGTGGAC AGTTCGGTTG CGGCATGTCT GGCGAGGACC GGTGCTATCG TGGTGGTGCC GGACTACAAC GCGCCGCTCG GGCCGGTCTT CCCCAGTCCG CTTGAGGTGG GTTTTTCGAT TTTCTCCTAT CTCGCCAACA AGCGTGCCGG GCTTGGCGAC CGTAAATCGC TGCTGTTGCT GGCAGGCGTT GAGGCGGGTG GTAATATTGC CGCCAGCGTC GCGCTGAAGG CACGGGATCA TTTCGCCAAC GAACTCGACG GCCAGATCCT GCTGTCGCCG CTGCTCGACC CATTCATGGG GACGGCTTCC ATCCGTGAAG CGGAAGCCAT CGGCATGCGG GAGCGCTGGG CGGAAGGCTG GAGCCGCTAT CTCAGTGGTG GCGGATGCCA TCCCTATGCC GCACCTTGTC TCTGTTCGCG CCTTGCAGGC GTCGCGCCTG CTTTGGTTTT GAGCGCAGAG GACGATCCAC TGCGTGATGA AAGTCTTGCG TTCGCGCAAA GCCTGAAACA GGCAGGCGTT AAAACCTGTA GCCAGATCCT GCCTTCGGGG AAGGGCTGGT CATCCATCTA TGGCAGTCAA CAGAGCCATG CATCGACATG GGAGCCTGAG CTTGAAAGCC AGTTCGAGGA CTTCGTTAAA CAGATCAGCA TTCGCTAG
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Protein sequence | MSVQVKDMVL DKLAVGPVSA RVYQGAEYGK GPPVVLFFHA GAFMASGVVD SSVAACLART GAIVVVPDYN APLGPVFPSP LEVGFSIFSY LANKRAGLGD RKSLLLLAGV EAGGNIAASV ALKARDHFAN ELDGQILLSP LLDPFMGTAS IREAEAIGMR ERWAEGWSRY LSGGGCHPYA APCLCSRLAG VAPALVLSAE DDPLRDESLA FAQSLKQAGV KTCSQILPSG KGWSSIYGSQ QSHASTWEPE LESQFEDFVK QISIR
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