| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5469 |
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| Symbol | |
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| ID | 7381560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 469565 |
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| End bp | 470533 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643649067 |
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| Product | ABC transporter substrate binding protein (aliphatic sulfonate) |
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| Protein accession | YP_002547304 |
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| Protein GI | 222106513 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGAAT TGACCCGCCG CCTGTTCACG ACAGGTGCCC TTGGCTCCCT CGCCTTCTCC
CTGGCGCTTG GCGCTGCATT TCGCGCTCAG GCCGAAGGAC TGGGTACCTT GAAAATCGGC
TACCAGAAAA CAGGTCTGCC CGTCATCGCA CGCCAGCAGG GCGTGATCGA AGCCGCTCTC
AAATCGCAGG GGACCTCGGT ATCCTGGGTG GAGTTCGCCG CCGGGCCGCC GCTGGTGGAG
GCCTTGAATG TCGGCTCCGT CCATGTCGGC TGGACAGGAG ATGCGCCGCC AATTTTCGGT
CAGGCATCCG GGGCAGCCAT CGTCTATGCT GCGGCGCTAC CACCAAATGG CAAAGGCGAA
GGCATCGTCG TCAAGGCCAG TTCCGGCATC AAGGATCTGG CCGGTCTCAA GGGCCGCAAG
GTCGCGGTCG GAAAAGGTAC CAGCGCCCAT AACCTCGTTG TGGTTGCCCT GGAAAAGGCC
GGGATCGGCT TTGACGAGAT CACCCCAGTC TATCTGGGCC CGGCGGATGC GGCGGCGGCC
TTTGCCAGCG ACAAGGTGGA CGCCTGGGCC GTCTGGGACC CGTTCCTGGC GATTGCCGAG
ACCCGATATG ATCTGGTGAC GCTCGCCCGC TCCAGCGAAG TGCTTGACGT CAAAACCTAT
TTTCTCGCCA ATCGCGACTT TGCAGCAAGC CATCCCGACA CATTGGCAAC CGTATTGAAG
GCGCTCACTG TTGCAGCGGA ATGGTCCGCC AACAATCGCG ATCAATTGGC CGCCGCCCTG
CATGAGATTA CCGGCGTGCC GCTCAACGCC CAGACTTTGG CTGCCAACCG GGCCGAGTTC
GGCATTTTCA AGATTACCGA CGAGATCGTG GCAACCCAGC AAGAGACGGC AGACCGTTTC
TTCCGGCTTG GCCTGATCCC GAAGAAAATC AACATCAAAG ACGCCGTGTG GGTTGCGCCA
GCCAACTGA
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| Protein sequence | MTELTRRLFT TGALGSLAFS LALGAAFRAQ AEGLGTLKIG YQKTGLPVIA RQQGVIEAAL
KSQGTSVSWV EFAAGPPLVE ALNVGSVHVG WTGDAPPIFG QASGAAIVYA AALPPNGKGE
GIVVKASSGI KDLAGLKGRK VAVGKGTSAH NLVVVALEKA GIGFDEITPV YLGPADAAAA
FASDKVDAWA VWDPFLAIAE TRYDLVTLAR SSEVLDVKTY FLANRDFAAS HPDTLATVLK
ALTVAAEWSA NNRDQLAAAL HEITGVPLNA QTLAANRAEF GIFKITDEIV ATQQETADRF
FRLGLIPKKI NIKDAVWVAP AN
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