Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5467 |
Symbol | |
ID | 7381558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 467837 |
End bp | 468664 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643649065 |
Product | ABC transporter nucleotide binding/ATPase protein (aliphatic sulfonate) |
Protein accession | YP_002547302 |
Protein GI | 222106511 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0163214 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGCAA CAACAGTGAC GCGGCTTCGG CCAATTCAGG AAGCACATCC TGCAACAAGA CAGGAACAGG CATCCCAACC GGTGCTTGCC AGCGCCCGCC CGGCTTTTTC CTTCCGCAAT GTCCGAAAGA GTTTCGGGAC ACAGACCGTG CTTGATGGCA TAAACCTCGA TGTCGCCGAA GGTGAGTTCC TGGCGATCAT CGGCAAGAGC GGCTGTGGCA AAAGCACCCT GCTGCGGTTG CTGGCCGGGC TGGACAAACC AAGTTCCGGC GAACTTATCC ATCATGCCGA CAAGAGCGAT GCTGCCCGGG TTCGAATGAT GTTTCAGGAA CCGCGTCTTC TGCCCTGGGC AAAGATCGAC GACAATGTCG CCGTCGGACT GACCGGAATT GCCAAGGGCA AGGAAGCGCT TTCGGCGGCC CGCGCCCTGT TGGAAGAGGT CGGCCTTGGC GCACGGGCCA GCGAATGGCC CTCCGTTCTC TCAGGCGGCC AGAAACAGCG CGTCGCGCTT GCCCGCGCCT TGGCGGCGCA TCCGCATATC CTGGCGCTGG ATGAACCGCT GGGCGCGCTC GATGCCCTAA CCCGGATCGA AATGCAGCAA TTGCTGGAAC GGATCTGGCA AAAGCAACGG TTCACGGCGG TGCTGGTCAC CCATGACGTG TCGGAAGCCG TCGCCCTCGC CGATCGGATC GTCGTCATCG ACGCCGGACG CATTGCGCTC GATCTCAAGG TTTCACTGCC ACGCCCAAGG CGGCATGCCA CGGCAGAATG CGCGGCAATC GAAGCACAGA TATTGGGGAA ACTGCTGGGA GAAGCGGCCC AAGCGTGA
|
Protein sequence | MTATTVTRLR PIQEAHPATR QEQASQPVLA SARPAFSFRN VRKSFGTQTV LDGINLDVAE GEFLAIIGKS GCGKSTLLRL LAGLDKPSSG ELIHHADKSD AARVRMMFQE PRLLPWAKID DNVAVGLTGI AKGKEALSAA RALLEEVGLG ARASEWPSVL SGGQKQRVAL ARALAAHPHI LALDEPLGAL DALTRIEMQQ LLERIWQKQR FTAVLVTHDV SEAVALADRI VVIDAGRIAL DLKVSLPRPR RHATAECAAI EAQILGKLLG EAAQA
|
| |